PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d2nlya1

Fold library id	Fold	Superfamily	Family
d2nlya1	7-stranded beta/alpha barrel	Glycoside hydrolase/deacetylase	Divergent polysaccharide deacetylase

Links to external resources
Added to library: Tue Mar 16 12:40:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K R A A I I I D D F G G D V K G V D D F L T G E I P V T V A V M P F L E H S T K Q A E I A Q A A G L E V I V H M P L E P K P S G I T S N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T
S S
S S S T T T T
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S V G E V K S R V R K A F D D I P Y A V G L N N H M G S K I V E N E K I M R A I L E V V K E K N A F I I D S G T S P H S L I P Q L A E E L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T G G G
T T
S S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V P Y A T R S I F L D N T H S S R K E V I K N M R K L A K K A K Q G S E P I G I G H V G V R G D E T Y A G I R S M L D E F Q A E S I Q L V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T T S
S T T G G G T T

. . . . . .

Sequence V S Q L L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	R	A	A	I	I	I	D	D	F	G	G	D	V	K	G	V	D	D	F	L	T	G	E	I	P	V	T	V	A	V	M	P	F	L	E	H	S	T	K	Q	A	E	I	A	Q	A	A	G	L	E	V	I	V	H	M	P	L	E	P	K	P	S	G	I	T	S	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S			T	T						T		S	S								S	S	S	T	T											T	T																B		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	V	G	E	V	K	S	R	V	R	K	A	F	D	D	I	P	Y	A	V	G	L	N	N	H	M	G	S	K	I	V	E	N	E	K	I	M	R	A	I	L	E	V	V	K	E	K	N	A	F	I	I	D	S	G	T	S	P	H	S	L	I	P	Q	L	A	E	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	T	T										T	T	G	G	G															T	T										S	S		S								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	P	Y	A	T	R	S	I	F	L	D	N	T	H	S	S	R	K	E	V	I	K	N	M	R	K	L	A	K	K	A	K	Q	G	S	E	P	I	G	I	G	H	V	G	V	R	G	D	E	T	Y	A	G	I	R	S	M	L	D	E	F	Q	A	E	S	I	Q	L	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S			T	T																			T	T	S									S	T	T									G	G	G							T	T
	.	.	.	.	.	.
Sequence	V	S	Q	L	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G