PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1xw8a_

Fold library id	Fold	Superfamily	Family
d1xw8a_	7-stranded beta/alpha barrel	Glycoside hydrolase/deacetylase	LamB/YcsF-like

Links to external resources
Added to library: Tue Mar 16 12:07:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X K I D L N A D L G E G C A S D A E L L T L V S S A N I A C G F H A G D A Q I X Q A C V R E A I K N G V A I G A H P S F P S A X Q L P P E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S
S
S
S S S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V Y A Q T L Y Q I G A L A T I A R A Q G G V X R H V K P H G X L Y N Q A A K E A Q L A D A I A R A V Y A C D P A L I L V G L A G S E L I R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G K Q Y G L T T R E E V F A D R G Y Q A D G S L V P R S Q S G E E Q A L A Q T L E X V Q H G R V K S I T G E W A T V A A Q T V C L H G D G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
B
T T S S B
T T T
T T S
T T S

. . . . . . . . . 220 . . . . . . . . . 230

Sequence A L A F A R R L R S A F I V V A A L E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	I	D	L	N	A	D	L	G	E	G	C	A	S	D	A	E	L	L	T	L	V	S	S	A	N	I	A	C	G	F	H	A	G	D	A	Q	I	X	Q	A	C	V	R	E	A	I	K	N	G	V	A	I	G	A	H	P	S	F	P	S	A	X	Q	L	P	P	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B							S	S	S		S										S							S	S	S	S																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	A	Q	T	L	Y	Q	I	G	A	L	A	T	I	A	R	A	Q	G	G	V	X	R	H	V	K	P	H	G	X	L	Y	N	Q	A	A	K	E	A	Q	L	A	D	A	I	A	R	A	V	Y	A	C	D	P	A	L	I	L	V	G	L	A	G	S	E	L	I	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T																	T	T																	T	T							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	K	Q	Y	G	L	T	T	R	E	E	V	F	A	D	R	G	Y	Q	A	D	G	S	L	V	P	R	S	Q	S	G	E	E	Q	A	L	A	Q	T	L	E	X	V	Q	H	G	R	V	K	S	I	T	G	E	W	A	T	V	A	A	Q	T	V	C	L	H	G	D	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									T	T	S		B		T	T	S	S	B			T	T	T				T	T												S					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Sequence	A	L	A	F	A	R	R	L	R	S	A	F	I	V	V	A	A	L	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															B