PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3chvA_

Fold library id	PDB Header	Molecule	Title
c3chvA_	PDB header: metal binding protein	Chain: A: PDB Molecule: prokaryotic domain of unknown function (duf849) with a tim	PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution

Links to external resources
Added to library: Tue Mar 16 12:30:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A N K P C I I C V A I T G S V P T K A D N P A V P I T V S E Q V E S T Q E A F E A G A A I A H C H V R N D D G T P S S D P D R F A R L T E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
T T T
T T
S T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L H T H C P G X I V Q F S T G G R S G A G Q A R G G X L P L K P D X A S L S V G S N N F P S R V Y E N P P D L V D W L A A Q X R S Y R V T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T T
G G G G G T T G G G
S
S
S S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E I E A F D L S H I L R A I D X H G R G L L Y G K L Y V Q F V X G V K N A X P A D R E V F D F Y V R X X R T R A P Q A E W C A A G I G A N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
S
S S
T T S
T T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . .

Sequence L T V N E W A I A A G G H T R T G L E D N I R L D R Q T L A P S N A A L V R R S V E L C D K Y Q R P V A S W Q Q A R E I L G L P A A A R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T T
B S S S S
B
T T
B
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	N	K	P	C	I	I	C	V	A	I	T	G	S	V	P	T	K	A	D	N	P	A	V	P	I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B									S	S			T	T	T		T	T				S															T											T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	H	T	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D	X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T									T	T	T			G	G	G	G	G	T	T	G	G	G			S							S					S	S	S																				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S													T	T		S		S	S										T	T	S																				T	T	S								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Sequence	L	T	V	N	E	W	A	I	A	A	G	G	H	T	R	T	G	L	E	D	N	I	R	L	D	R	Q	T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C	D	K	Y	Q	R	P	V	A	S	W	Q	Q	A	R	E	I	L	G	L	P	A	A	A	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T						S	T	T	T			B	S	S	S	S		B																		T	T			B										T	T			S	S