PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ugsB_

Fold library id	PDB Header	Molecule	Title
c3ugsB_	PDB header: transferase	Chain: B: PDB Molecule: undecaprenyl pyrophosphate synthase;	PDBTitle: crystal structure of a probable undecaprenyl diphosphate synthase2 (upps) from campylobacter jejuni

Links to external resources
Added to library: Sat Dec 3 17:40:11 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N E L K H L A V V M D G N R S Q G V K T M Q K L M E V C M E E N I S N L S L F A F S T E N W K R P K D E I D F I F E L L D R C L D E A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K F E K N N V R L R A I G D L S R L E D K V R E K I T L V E E K T K H C D A L C V N L A I S Y G A R D E I I R A A K R V I E K K L E L N E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T S
G G G S
T T
S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence N L T Q N L D L P L D V D L M L R V G N A K R L S N F L L W Q C S Y A E I Y F S E T L F P S L T K R E F K R I I K E F R N R E R T F G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
S
S S S
S
T T S S T T T T T T
S
S T T
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	E	L	K	H	L	A	V	V	M	D	G	N	R	S	Q	G	V	K	T	M	Q	K	L	M	E	V	C	M	E	E	N	I	S	N	L	S	L	F	A	F	S	T	E	N	W	K	R	P	K	D	E	I	D	F	I	F	E	L	L	D	R	C	L	D	E	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T											S	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	F	E	K	N	N	V	R	L	R	A	I	G	D	L	S	R	L	E	D	K	V	R	E	K	I	T	L	V	E	E	K	T	K	H	C	D	A	L	C	V	N	L	A	I	S	Y	G	A	R	D	E	I	I	R	A	A	K	R	V	I	E	K	K	L	E	L	N	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T	T							S		G	G	G	S																T	T			S																									T	T				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	N	L	T	Q	N	L	D	L	P	L	D	V	D	L	M	L	R	V	G	N	A	K	R	L	S	N	F	L	L	W	Q	C	S	Y	A	E	I	Y	F	S	E	T	L	F	P	S	L	T	K	R	E	F	K	R	I	I	K	E	F	R	N	R	E	R	T	F	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S	S		S			S						S	S			S		T	T	S	S	T	T	T	T	T	T								S		S	T	T																S				T	T