PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1w17A_

Fold library id	PDB Header	Molecule	Title
c1w17A_	PDB header: hydrolase	Chain: A: PDB Molecule: probable polysaccharide deacetylase pdaa;	PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.

Links to external resources
Added to library: Tue Mar 16 13:00:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V P N E P I N W G F K R S V N H Q P P D A G K Q L N S L I E K Y D A F Y L G N T K E K T I Y L T F D N G Y E N G Y T P K V L D V L K K H R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S B
T T T T S S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T G T F F V T G H F V K D Q P Q L I K R M S D E G H I I G N H S F H H P D L T T K T A D Q I Q D E L D S V N E E V Y K I T G K Q D N L Y L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
G G G S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P P R G V F S E Y V L K E T K R L G Y Q T V F W S V A F V D W K I N N Q K G K K Y A Y D H M I K Q A H P G A I Y L L H T V S R D N A E A L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
S B
S
T T
T
T T
S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . .

Sequence D A I T D L K K Q G Y T F K S I D D L M F E K E M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	N	E	P	I	N	W	G	F	K	R	S	V	N	H	Q	P	P	D	A	G	K	Q	L	N	S	L	I	E	K	Y	D	A	F	Y	L	G	N	T	K	E	K	T	I	Y	L	T	F	D	N	G	Y	E	N	G	Y	T	P	K	V	L	D	V	L	K	K	H	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T																T	T			S	B			T	T	T	T									S	S			S												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	T	F	F	V	T	G	H	F	V	K	D	Q	P	Q	L	I	K	R	M	S	D	E	G	H	I	I	G	N	H	S	F	H	H	P	D	L	T	T	K	T	A	D	Q	I	Q	D	E	L	D	S	V	N	E	E	V	Y	K	I	T	G	K	Q	D	N	L	Y	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T								S	S				G	G	G	S																					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	P	R	G	V	F	S	E	Y	V	L	K	E	T	K	R	L	G	Y	Q	T	V	F	W	S	V	A	F	V	D	W	K	I	N	N	Q	K	G	K	K	Y	A	Y	D	H	M	I	K	Q	A	H	P	G	A	I	Y	L	L	H	T	V	S	R	D	N	A	E	A	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G													T	T							S	B			S				T	T															T			T	T							S		S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Sequence	D	A	I	T	D	L	K	K	Q	G	Y	T	F	K	S	I	D	D	L	M	F	E	K	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T