PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1nfpa_

Fold library id	Fold	Superfamily	Family
d1nfpa_	TIM beta/alpha-barrel	Bacterial luciferase-like	Non-fluorescent flavoprotein (luxF, FP390)

Links to external resources
Added to library: Tue Mar 16 13:26:51 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T K W N Y G V F F L N F Y H V G Q Q E P S L T M S N A L E T L R I I D E D T S I Y D V V A F S E H H I D K S Y N D E T K L A P F V S L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T
T
S
T T S
B
T T S
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q I H V L A T S P E T V V K A A K Y G M P L L F K W D D S Q Q K R I E L L N H Y Q A A A A K F N V D I A N V R H R L M L F V N V N D N P T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T S
T
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A K A E L S I Y L E D Y L S Y T Q A E T S I D E I I N S N A A G N F D T C L H H V A E M A Q G L N N K V D F L F C F E S M K D Q E N K K S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T S
T T T
T T

. . . . . . . . . 220 . . . . . . . .

Sequence M I N F D K R V I N Y R K E H N L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	K	W	N	Y	G	V	F	F	L	N	F	Y	H	V	G	Q	Q	E	P	S	L	T	M	S	N	A	L	E	T	L	R	I	I	D	E	D	T	S	I	Y	D	V	V	A	F	S	E	H	H	I	D	K	S	Y	N	D	E	T	K	L	A	P	F	V	S	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		S	T	T																				T		S										T	T	S			B		T	T	S		B								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	I	H	V	L	A	T	S	P	E	T	V	V	K	A	A	K	Y	G	M	P	L	L	F	K	W	D	D	S	Q	Q	K	R	I	E	L	L	N	H	Y	Q	A	A	A	A	K	F	N	V	D	I	A	N	V	R	H	R	L	M	L	F	V	N	V	N	D	N	P	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S										T	T							T	T	S																				T				T	T													S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	A	E	L	S	I	Y	L	E	D	Y	L	S	Y	T	Q	A	E	T	S	I	D	E	I	I	N	S	N	A	A	G	N	F	D	T	C	L	H	H	V	A	E	M	A	Q	G	L	N	N	K	V	D	F	L	F	C	F	E	S	M	K	D	Q	E	N	K	K	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T		S	S								T	S																			T	T	T									T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	M	I	N	F	D	K	R	V	I	N	Y	R	K	E	H	N	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T