Fold library entry viewer: d1ur4a_

Added to library: Tue Mar 16 12:00:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	L	Y	V	E	K	V	S	G	L	R	K	D	F	I	K	G	V	D	V	S	S	I	I	A	L	E	E	S	G	V	A	F	Y	N	E	S	G	K	K	Q	D	I	F	K	T	L	K	E	A	G	V	N	Y	V	R	V	R	I	W	N	D	P	Y	D	A	N	G	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			T	T								T	T							T	T				B		T	T	S		B										T	T										S			B		T	T			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	G	G	G	N	N	D	L	E	K	A	I	Q	I	G	K	R	A	T	A	N	G	M	K	L	L	A	D	F	H	Y	S	D	F	W	A	D	P	A	K	Q	K	A	P	K	A	W	A	N	L	N	F	E	D	K	K	T	A	L	Y	Q	Y	T	K	Q	S	L	K	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T																	T	T									S	S	S	S			S	S	S						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	A	A	G	I	D	I	G	M	V	Q	V	G	N	E	T	N	G	G	L	A	G	E	T	D	W	A	K	M	S	Q	L	F	N	A	G	S	Q	A	V	R	E	T	D	S	N	I	L	V	A	L	H	F	T	N	P	E	T	S	G	R	Y	A	W	I	A	E	T	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									S	S	S		S	S		B	T	T	B																						T	T	S									T	T	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	H	H	V	D	Y	D	V	F	A	S	S	Y	Y	P	F	W	H	G	T	L	K	N	L	T	S	V	L	T	S	V	A	D	T	Y	G	K	K	V	M	V	A	E	T	S	Y	T	Y	T	A	E	D	G	D	G	H	G	N	T	A	P	K	N	G	Q	T	L	N	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				S								T	T	T	S																														S		S			S	S	S	S			S	S	S		T	T	S				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	T	V	Q	G	Q	A	N	A	V	R	D	V	I	Q	A	V	S	D	V	G	E	A	G	I	G	V	F	Y	W	E	P	A	W	I	P	V	G	P	A	H	R	L	E	K	N	K	A	L	W	E	T	Y	G	S	G	W	A	T	S	Y	A	A	E	Y	D	P	E	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T	T		T	T									T	T				S	S		G	G	G														S	S	B		G	G	G	T	T	T		T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Sequence	G	K	W	F	G	G	S	A	V	D	N	Q	A	L	F	D	F	K	G	R	P	L	P	S	L	H	V	F	Q	Y	V	D	T	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	S		S		G	G	G		S	B		T	T	S		B		G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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