Fold library entry viewer: c3la4A_

Added to library: Sat Aug 28 21:47:55 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	L	S	P	R	E	V	E	K	L	G	L	H	N	A	G	Y	L	A	Q	K	R	L	A	R	G	V	R	L	N	Y	T	E	A	V	A	L	I	A	S	Q	I	M	E	Y	A	R	D	G	E	K	T	V	A	Q	L	M	L	G	Q	H	L	L	G	R	R	Q	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T			B																				T		S								G	G	G	S			G	G	G	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	V	P	H	L	L	N	A	V	Q	V	E	A	T	F	P	D	G	T	K	L	V	T	V	H	D	P	I	S	R	E	N	G	E	L	Q	E	A	L	F	G	S	L	L	P	V	P	S	L	D	K	F	A	E	D	N	R	I	P	G	E	I	L	C	E	D	E	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S									T	T									S				S	S	S							T	T	T	T							G	G	G	S							T	T						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	L	N	I	G	R	K	A	V	I	L	K	V	T	S	K	G	D	R	P	I	Q	V	G	S	H	Y	H	F	I	E	V	N	P	Y	L	T	F	D	R	R	K	A	Y	G	M	R	L	N	I	A	A	G	T	A	V	R	F	E	P	G	D	K	S	V	T	L	V	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T													S	S						T	T	S		G	G	G	S		T	T			B						T	T					S		T	T							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	G	N	K	V	I	R	G	G	N	A	I	A	D	G	P	V	N	E	T	N	L	E	A	A	M	H	A	V	R	S	K	G	F	G	H	E	E	E	K	D	A	S	E	G	F	T	K	E	D	P	N	C	P	F	N	T	F	I	H	R	K	E	Y	A	N	K	Y	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					S	T	T	S	S	S				S	S															T			B				T	T								S		T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	G	D	K	I	R	L	G	D	T	N	L	L	A	E	I	E	K	D	Y	A	L	Y	G	D	E	C	V	F	G	G	G	K	V	I	R	D	G	M	G	Q	S	C	G	H	P	P	A	I	S	L	D	T	V	I	T	N	A	V	I	I	D	Y	T	G	I	I	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						T	T	S	S												T	T						S	T	T	S	S	S	S	B	T	T	T	B		S	S	S		G	G	G	S		S											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	I	G	I	K	D	G	L	I	A	S	I	G	K	A	G	N	P	D	I	M	N	G	V	F	S	N	M	I	I	G	A	N	T	E	V	I	A	G	E	G	L	I	V	T	A	G	A	I	D	C	H	V	H	Y	I	C	P	Q	L	V	Y	E	A	I	S	S	G	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T									B		T	T	T		S	S			T	T	S	B			T	T							T	T															S		T										T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	L	V	G	G	G	T	G	P	A	A	G	T	R	A	T	T	C	T	P	S	P	T	Q	M	R	L	M	L	Q	S	T	D	D	L	P	L	N	F	G	F	T	G	K	G	S	S	S	K	P	D	E	L	H	E	I	I	K	A	G	A	M	G	L	L	H	E	D	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S							S	S				S											T	T	T	S	S	S					B						S	S	S										T		S	B			B	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	T	P	A	A	I	D	N	C	L	T	I	A	E	H	H	D	I	Q	I	N	I	H	T	D	T	L	N	E	A	G	F	V	E	H	S	I	A	A	F	K	G	R	T	I	H	T	Y	H	S	E	G	A	G	G	G	H	A	P	D	I	I	K	V	C	G	I	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T		B				B			T	T		S	S											T	T						T	T	T	T	S	T	T	S		S	T	T	T	G	G	G	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	P	S	S	T	N	P	T	R	P	L	T	S	N	T	I	D	E	H	L	D	M	L	M	V	H	H	L	D	R	E	I	P	E	D	L	A	F	A	H	S	R	I	R	K	K	T	I	A	A	E	D	V	L	N	D	I	G	A	I	S	I	I	S	S	D	S	Q	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T	S	S		B	T	T																T	T	S											S														T	T	S	S							T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	R	V	G	E	V	I	S	R	T	W	Q	T	A	D	K	M	K	A	Q	T	G	P	L	K	C	D	S	S	D	N	D	N	F	R	I	R	R	Y	I	A	K	Y	T	I	N	P	A	I	A	N	G	F	S	Q	Y	V	G	S	V	E	V	G	K	L	A	D	L	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G																		S		T	T	S		S	S											T	T	T	T								T		T	T	T	S	S	S	S		T	T	S	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	W	K	P	S	F	F	G	T	K	P	E	M	V	I	K	G	G	M	V	A	W	A	D	I	G	D	P	N	A	S	I	P	T	P	E	P	V	K	M	R	P	M	Y	G	T	L	G	K	A	G	G	A	L	S	I	A	F	V	S	K	A	A	L	D	Q	R	V	N	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	T	T			S					T	T										T	T	S	S	S	S		S	S								G	G	G	S	T	T					T												T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
Sequence	Y	G	L	N	K	R	V	E	A	V	S	N	V	R	K	L	T	K	L	D	M	K	L	N	D	A	L	P	E	I	T	V	D	P	E	S	Y	T	V	K	A	D	G	K	L	L	C	V	S	E	A	T	T	V	P	L	S	R	N	Y	F	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S									S	S			G	G	G	S	T	T											T	T	T						T	T								B	S			S	S	S	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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