Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	L	K	R	Y	L	V	L	S	V	A	T	A	A	F	S	L	P	S	L	V	N	A	A	Q	Q	N	I	L	S	V	H	I	L	N	Q	Q	T	G	K	P	A	A	D	V	T	V	T	L	E	K	K	A	D	N	G	W	L	Q	L
Secondary structure
SS confidence
Disorder		?	?	?	?											?	?	?	?	?	?	?	?	?	?	?	?	?									?	?															?		?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		N	T	A	K	T	D	K	D	G	R	I	K	A	L	W	P	E	Q	T	A	T	T	G	D	Y	R	V	V	F	K	T	G	D	Y	F	K	K	Q	N	L	E	S	F	F	P	E	I	P	V	E	F	H	I	N	K	V	N	E	H	Y
Secondary structure
SS confidence
Disorder																	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Sequence		H	V	P	L	L	L	S	Q	Y	G	Y	S	T	Y	R	G	S
Secondary structure
SS confidence
Disorder																?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2h1x chain B Region: 27 - 137 Aligned: 111 Modelled: 111 Confidence: 100.0% Identity: 40% PDB header:hydrolase Chain: B: PDB Molecule:5-hydroxyisourate hydrolase (formerly known as PDBTitle: crystal structure of 5-hydroxyisourate hydrolase (formerly2 known as trp, transthyretin related protein) Phyre2 PDB 2gpz chain C Region: 29 - 137 Aligned: 108 Modelled: 109 Confidence: 100.0% Identity: 77% PDB header:hydrolase Chain: C: PDB Molecule:transthyretin-like protein; PDBTitle: transthyretin-like protein from salmonella dublin Phyre2 PDB 1tta chain A Region: 23 - 133 Aligned: 111 Modelled: 111 Confidence: 100.0% Identity: 32% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 1oo2 chain A Region: 26 - 133 Aligned: 108 Modelled: 108 Confidence: 100.0% Identity: 38% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 1kgi chain A Region: 25 - 133 Aligned: 109 Modelled: 109 Confidence: 100.0% Identity: 36% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 1f86 chain A Region: 27 - 133 Aligned: 107 Modelled: 107 Confidence: 100.0% Identity: 33% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 1tfp chain A Region: 27 - 133 Aligned: 107 Modelled: 107 Confidence: 100.0% Identity: 39% Fold: Prealbumin-like Superfamily: Transthyretin (synonym: prealbumin) Family: Transthyretin (synonym: prealbumin) Phyre2 PDB 2h0e chain A Region: 26 - 137 Aligned: 109 Modelled: 111 Confidence: 100.0% Identity: 38% PDB header:hydrolase Chain: A: PDB Molecule:transthyretin-like protein pucm; PDBTitle: crystal structure of pucm in the absence of substrate Phyre2 PDB 3qva chain B Region: 25 - 136 Aligned: 105 Modelled: 112 Confidence: 100.0% Identity: 36% PDB header:hydrolase Chain: B: PDB Molecule:transthyretin-like protein; PDBTitle: structure of klebsiella pneumoniae 5-hydroxyisourate hydrolase Phyre2 PDB 2azq chain A Region: 29 - 122 Aligned: 87 Modelled: 94 Confidence: 94.5% Identity: 25% PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2-dioxygenase; PDBTitle: crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla2 c-1 Phyre2 PDB 3n9t chain A Region: 29 - 117 Aligned: 83 Modelled: 89 Confidence: 94.1% Identity: 24% PDB header:oxidoreductase Chain: A: PDB Molecule:pnpc; PDBTitle: cryatal structure of hydroxyquinol 1,2-dioxygenase from pseudomonas2 putida dll-e4 Phyre2 PDB 3kpt chain A Region: 25 - 88 Aligned: 57 Modelled: 64 Confidence: 93.8% Identity: 21% PDB header:cell adhesion Chain: A: PDB Molecule:collagen adhesion protein; PDBTitle: crystal structure of bcpa, the major pilin subunit of2 bacillus cereus Phyre2 PDB 3pcc chain M Region: 29 - 87 Aligned: 54 Modelled: 59 Confidence: 93.4% Identity: 24% Fold: Prealbumin-like Superfamily: Aromatic compound dioxygenase Family: Aromatic compound dioxygenase Phyre2 PDB 1tmx chain A Region: 29 - 128 Aligned: 94 Modelled: 100 Confidence: 92.7% Identity: 13% PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyquinol 1,2-dioxygenase; PDBTitle: crystal structure of hydroxyquinol 1,2-dioxygenase from2 nocardioides simplex 3e Phyre2 PDB 1cwv chain A domain 1 Region: 19 - 93 Aligned: 71 Modelled: 75 Confidence: 92.3% Identity: 21% Fold: Immunoglobulin-like beta-sandwich Superfamily: Invasin/intimin cell-adhesion fragments Family: Invasin/intimin cell-adhesion fragments Phyre2 PDB 2pz4 chain A Region: 34 - 88 Aligned: 51 Modelled: 55 Confidence: 92.2% Identity: 22% PDB header:cell adhesion Chain: A: PDB Molecule:protein gbs052; PDBTitle: crystal structure of spab (gbs52), the minor pilin in gram-positive2 pathogen streptococcus agalactiae Phyre2 PDB 1h8l chain A domain 1 Region: 29 - 94 Aligned: 54 Modelled: 66 Confidence: 91.9% Identity: 22% Fold: Prealbumin-like Superfamily: Carboxypeptidase regulatory domain-like Family: Carboxypeptidase regulatory domain Phyre2 PDB 1h8l chain A Region: 15 - 94 Aligned: 67 Modelled: 80 Confidence: 91.8% Identity: 22% PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa Phyre2 PDB 3hj8 chain A Region: 29 - 87 Aligned: 54 Modelled: 59 Confidence: 90.9% Identity: 24% PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2-dioxygenase; PDBTitle: crystal structure determination of catechol 1,2-dioxygenase from2 rhodococcus opacus 1cp in complex with 4-chlorocatechol Phyre2 PDB 2bur chain B domain 1 Region: 29 - 87 Aligned: 54 Modelled: 59 Confidence: 90.7% Identity: 22% Fold: Prealbumin-like Superfamily: Aromatic compound dioxygenase Family: Aromatic compound dioxygenase Phyre2 1 c2h1xB_ 2 c2gpzC_ 3 d1ttaa_ 4 d1oo2a_ 5 d1kgia_ 6 d1f86a_ 7 d1tfpa_ 8 c2h0eA_ 9 c3qvaB_ 10 c2azqA_ 11 c3n9tA_ 12 c3kptA_ 13 d3pccm_ 14 c1tmxA_ 15 d1cwva1 16 c2pz4A_ 17 d1h8la1 18 c1h8lA_ 19 c3hj8A_ 20 d2burb1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2h1xB_ 100.0 40 PDB header:hydrolase Chain: B: PDB Molecule:5-hydroxyisourate hydrolase (formerly known as PDBTitle: crystal structure of 5-hydroxyisourate hydrolase (formerly2 known as trp, transthyretin related protein) 2 c2gpzC_ 100.0 77 PDB header:hydrolase Chain: C: PDB Molecule:transthyretin-like protein; PDBTitle: transthyretin-like protein from salmonella dublin 3 d1ttaa_ 100.0 32 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 4 d1oo2a_ 100.0 38 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 5 d1kgia_ 100.0 36 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 6 d1f86a_ 100.0 33 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 7 d1tfpa_ 100.0 39 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 8 c2h0eA_ 100.0 38 PDB header:hydrolase Chain: A: PDB Molecule:transthyretin-like protein pucm; PDBTitle: crystal structure of pucm in the absence of substrate 9 c3qvaB_ 100.0 36 PDB header:hydrolase Chain: B: PDB Molecule:transthyretin-like protein; PDBTitle: structure of klebsiella pneumoniae 5-hydroxyisourate hydrolase 10 c2azqA_ 94.5 25 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2-dioxygenase; PDBTitle: crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla2 c-1 11 c3n9tA_ 94.1 24 PDB header:oxidoreductase Chain: A: PDB Molecule:pnpc; PDBTitle: cryatal structure of hydroxyquinol 1,2-dioxygenase from pseudomonas2 putida dll-e4 12 c3kptA_ 93.8 21 PDB header:cell adhesion Chain: A: PDB Molecule:collagen adhesion protein; PDBTitle: crystal structure of bcpa, the major pilin subunit of2 bacillus cereus 13 d3pccm_ 93.4 24 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 14 c1tmxA_ 92.7 13 PDB header:oxidoreductase Chain: A: PDB Molecule:hydroxyquinol 1,2-dioxygenase; PDBTitle: crystal structure of hydroxyquinol 1,2-dioxygenase from2 nocardioides simplex 3e 15 d1cwva1 92.3 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 16 c2pz4A_ 92.2 22 PDB header:cell adhesion Chain: A: PDB Molecule:protein gbs052; PDBTitle: crystal structure of spab (gbs52), the minor pilin in gram-positive2 pathogen streptococcus agalactiae 17 d1h8la1 91.9 22 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Carboxypeptidase regulatory domain 18 c1h8lA_ 91.8 22 PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa 19 c3hj8A_ 90.9 24 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2-dioxygenase; PDBTitle: crystal structure determination of catechol 1,2-dioxygenase from2 rhodococcus opacus 1cp in complex with 4-chlorocatechol 20 d2burb1 90.7 22 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 21 d1s9aa_ not modelled 90.6 15 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 22 d1dmha_ not modelled 90.6 16 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 23 c2boyC_ not modelled 90.4 28 PDB header:oxidoreductase Chain: C: PDB Molecule:3-chlorocatechol 1,2-dioxygenase; PDBTitle: crystal structure of 3-chlorocatechol 1,2-dioxygenase from2 rhodococcus opacus 1cp 24 c3mn8A_ not modelled 89.4 27 PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short 25 c2xsuA_ not modelled 89.1 16 PDB header:oxidoreductase Chain: A: PDB Molecule:catechol 1,2 dioxygenase; PDBTitle: crystal structure of the a72g mutant of acinetobacter2 radioresistens catechol 1,2 dioxygenase 26 c3e8vA_ not modelled 88.9 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis 27 c3irpX_ not modelled 88.0 33 PDB header:cell adhesion Chain: X: PDB Molecule:uro-adherence factor a; PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution 28 d1f00i1 not modelled 87.7 29 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 29 d1nkga1 not modelled 85.5 19 Fold:Prealbumin-like Superfamily:Starch-binding domain-like Family:Rhamnogalacturonase B, RhgB, middle domain 30 d1uwya1 not modelled 85.3 18 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Carboxypeptidase regulatory domain 31 c2nsmA_ not modelled 85.2 17 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase n catalytic chain; PDBTitle: crystal structure of the human carboxypeptidase n (kininase i)2 catalytic domain 32 c1uwyA_ not modelled 85.1 19 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase m; PDBTitle: crystal structure of human carboxypeptidase m 33 c2ww8A_ not modelled 79.9 13 PDB header:cell adhesion Chain: A: PDB Molecule:cell wall surface anchor family protein; PDBTitle: structure of the pilus adhesin (rrga) from streptococcus2 pneumoniae 34 d2bura1 not modelled 79.8 19 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 35 c2x5pA_ not modelled 78.3 19 PDB header:protein binding Chain: A: PDB Molecule:fibronectin binding protein; PDBTitle: crystal structure of the streptococcus pyogenes fibronectin binding2 protein fbab-b 36 c1cwvA_ not modelled 77.3 20 PDB header:structural protein Chain: A: PDB Molecule:invasin; PDBTitle: crystal structure of invasin: a bacterial integrin-binding protein 37 d3pcca_ not modelled 74.9 13 Fold:Prealbumin-like Superfamily:Aromatic compound dioxygenase Family:Aromatic compound dioxygenase 38 c2p9rA_ not modelled 66.0 11 PDB header:signaling protein Chain: A: PDB Molecule:alpha-2-macroglobulin; PDBTitle: human alpha2-macroglogulin is composed of multiple domains,2 as predicted by homology with complement component c3 39 d1cwva2 not modelled 62.5 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 40 c2xtlB_ not modelled 55.5 18 PDB header:structural protein Chain: B: PDB Molecule:cell wall surface anchor family protein; PDBTitle: structure of the major pilus backbone protein from streptococcus2 agalactiae 41 c3htlX_ not modelled 50.2 25 PDB header:structural protein, cell adhesion Chain: X: PDB Molecule:putative surface-anchored fimbrial subunit; PDBTitle: structure of the corynebacterium diphtheriae major pilin2 spaa points to a modular pilus assembly with stabilizing3 isopeptide bonds 42 c2zxcA_ not modelled 48.2 16 PDB header:hydrolase Chain: A: PDB Molecule:neutral ceramidase; PDBTitle: seramidase complexed with c2 43 d1cwva3 not modelled 44.9 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 44 d2dmca1 not modelled 42.7 8 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 45 d1ix2a_ not modelled 30.0 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Copper resistance protein C (CopC, PcoC) 46 c2xicB_ not modelled 25.5 11 PDB header:cell adhesion Chain: B: PDB Molecule:ancillary protein 1; PDBTitle: pilus-presented adhesin, spy0125 (cpa), p212121 form (esrf data) 47 d2yzca2 not modelled 21.7 25 Fold:T-fold Superfamily:Tetrahydrobiopterin biosynthesis enzymes-like Family:Urate oxidase (uricase) 48 c2x9yA_ not modelled 19.6 22 PDB header:cell adhesion Chain: A: PDB Molecule:cell wall surface anchor family protein; PDBTitle: structure of the pilus backbone (rrgb) from streptococcus2 pneumoniae 49 c2yzbA_ not modelled 18.3 25 PDB header:oxidoreductase Chain: A: PDB Molecule:uricase; PDBTitle: crystal structure of uricase from arthrobacter globiformis2 in complex with uric acid (substrate) 50 c3hlkB_ not modelled 16.9 18 PDB header:hydrolase Chain: B: PDB Molecule:acyl-coenzyme a thioesterase 2, mitochondrial; PDBTitle: crystal structure of human mitochondrial acyl-coa2 thioesterase (acot2) 51 d2q3za1 not modelled 16.6 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Transglutaminase N-terminal domain 52 c2v1lA_ not modelled 15.2 13 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: structure of the conserved hypothetical protein vc1805 from2 pathogenicity island vpi-2 of vibrio cholerae o1 biovar3 eltor str. n16961 shares structural homology with the4 human p32 protein 53 c2w56B_ not modelled 14.7 15 PDB header:unknown function Chain: B: PDB Molecule:vc0508; PDBTitle: structure of the hypothetical protein vc0508 from vibrio cholerae2 vsp-ii pathogenicity island 54 c3rpkA_ not modelled 12.9 22 PDB header:cell adhesion Chain: A: PDB Molecule:backbone pilus subunit; PDBTitle: structure of the full-length major pilin rrgb from streptococcus2 pneumoniae 55 c2jmbA_ not modelled 12.7 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein atu4866; PDBTitle: solution structure of the protein atu4866 from agrobacterium2 tumefaciens 56 c3cu7A_ not modelled 12.4 17 PDB header:immune system Chain: A: PDB Molecule:complement c5; PDBTitle: human complement component 5 57 d2c9qa1 not modelled 12.2 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Copper resistance protein C (CopC, PcoC) 58 d1vrma1 not modelled 12.0 53 Fold:T-fold Superfamily:ApbE-like Family:ApbE-like 59 c3lznA_ not modelled 11.7 17 PDB header:transport protein Chain: A: PDB Molecule:p19 protein; PDBTitle: crystal structure analysis of the apo p19 protein from campylobacter2 jejuni at 1.59 a at ph 9 60 d1ju3a1 not modelled 11.5 19 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:PepX C-terminal domain-like 61 c2ougC_ not modelled 11.4 18 PDB header:transcription Chain: C: PDB Molecule:transcriptional activator rfah; PDBTitle: crystal structure of the rfah transcription factor at 2.1a2 resolution 62 c2jh3C_ not modelled 11.0 26 PDB header:ribosomal protein Chain: C: PDB Molecule:ribosomal protein s2-related protein; PDBTitle: the crystal structure of dr2241 from deinococcus2 radiodurans at 1.9 a resolution reveals a multi-domain3 protein with structural similarity to chelatases but also4 with two additional novel domains 63 c2djcA_ not modelled 11.0 57 PDB header:cytokine Chain: A: PDB Molecule:growth-blocking peptide; PDBTitle: solution structure of growth-blocking peptide of the2 tobacco cutworm, spodoptera litura 64 d1vjja1 not modelled 10.8 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Transglutaminase N-terminal domain 65 d1olma2 not modelled 10.7 30 Fold:Supernatant protein factor (SPF), C-terminal domain Superfamily:Supernatant protein factor (SPF), C-terminal domain Family:Supernatant protein factor (SPF), C-terminal domain 66 c1c8uA_ not modelled 10.5 14 PDB header:hydrolase Chain: A: PDB Molecule:acyl-coa thioesterase ii; PDBTitle: crystal structure of the e.coli thioesterase ii, a2 homologue of the human nef-binding enzyme 67 c1irrA_ not modelled 10.2 57 PDB header:cytokine Chain: A: PDB Molecule:paralytic peptide; PDBTitle: solution structure of paralytic peptide of the silkworm,2 bombyx mori 68 c3pvmB_ not modelled 10.0 29 PDB header:immune system Chain: B: PDB Molecule:cobra venom factor; PDBTitle: structure of complement c5 in complex with cvf 69 c1hrlA_ not modelled 9.2 57 PDB header:toxin Chain: A: PDB Molecule:paralytic peptide i; PDBTitle: structure of a paralytic peptide from an insect, manduca2 sexta 70 c1v28A_ not modelled 8.9 57 PDB header:toxin Chain: A: PDB Molecule:paralytic peptide; PDBTitle: solution structure of paralytic peptide of the wild2 silkmoth, antheraea yamamai 71 d1qhda2 not modelled 8.6 16 Fold:Viral protein domain Superfamily:Viral protein domain Family:Top domain of virus capsid protein 72 c2dj9A_ not modelled 8.6 57 PDB header:cytokine Chain: A: PDB Molecule:growth-blocking peptide; PDBTitle: solution structure of growth-blocking peptide of the2 cabbage armyworm, mamestra brassicae 73 c2y7uM_ not modelled 8.3 18 PDB header:virus Chain: M: PDB Molecule:coat protein; PDBTitle: x-ray structure of the grapevine fanleaf virus 74 d1zxqa1 not modelled 8.3 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C2 set domains 75 c2zxqA_ not modelled 8.1 24 PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of endo-alpha-n-acetylgalactosaminidase2 from bifidobacterium longum (engbf) 76 c1nkgA_ not modelled 8.0 17 PDB header:lyase Chain: A: PDB Molecule:rhamnogalacturonase b; PDBTitle: rhamnogalacturonan lyase from aspergillus aculeatus 77 d1c8ua1 not modelled 7.8 14 Fold:Thioesterase/thiol ester dehydrase-isomerase Superfamily:Thioesterase/thiol ester dehydrase-isomerase Family:Acyl-CoA thioesterase 78 c1o7dC_ not modelled 7.6 15 PDB header:hydrolase Chain: C: PDB Molecule:lysosomal alpha-mannosidase; PDBTitle: the structure of the bovine lysosomal a-mannosidase2 suggests a novel mechanism for low ph activation 79 d2g3ra1 not modelled 7.2 23 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 80 d1fcda2 not modelled 7.1 19 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 81 d1rm6a2 not modelled 7.1 20 Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain 82 d1z0mb1 not modelled 6.9 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:AMPK-beta glycogen binding domain-like 83 d1t2sa_ not modelled 6.9 18 Fold:SH3-like barrel Superfamily:PAZ domain Family:PAZ domain 84 c1zpuE_ not modelled 6.8 18 PDB header:oxidoreductase Chain: E: PDB Molecule:iron transport multicopper oxidase fet3; PDBTitle: crystal structure of fet3p, a multicopper oxidase that functions in2 iron import 85 d2vera1 not modelled 6.7 27 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Dr-family adhesin 86 d1zdxa1 not modelled 6.4 21 Fold:FimD N-terminal domain-like Superfamily:FimD N-terminal domain-like Family:Usher N-domain 87 c1fi8E_ not modelled 6.3 40 PDB header:hydrolase/hydrolase inhibitor Chain: E: PDB Molecule:ecotin; PDBTitle: rat granzyme b [n66q] complexed to ecotin [81-84 iepd] 88 c1d2pA_ not modelled 6.3 24 PDB header:structural protein Chain: A: PDB Molecule:collagen adhesin; PDBTitle: crystal structure of two b repeat units (b1b2) of the2 collagen binding protein (cna) of staphylococcus aureus 89 d1v6ea_ not modelled 6.2 13 Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related 90 c2o6dB_ not modelled 5.8 33 PDB header:membrane protein, protein binding Chain: B: PDB Molecule:34 kda membrane antigen; PDBTitle: structure of native rtp34 from treponema pallidum 91 c1kv3F_ not modelled 5.7 17 PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form 92 d1eala_ not modelled 5.5 15 Fold:Lipocalins Superfamily:Lipocalins Family:Fatty acid binding protein-like 93 c1t3qB_ not modelled 5.5 34 PDB header:oxidoreductase Chain: B: PDB Molecule:quinoline 2-oxidoreductase large subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 94 d1m7xa2 not modelled 5.4 15 Fold:Glycosyl hydrolase domain Superfamily:Glycosyl hydrolase domain Family:alpha-Amylases, C-terminal beta-sheet domain 95 c3nrqB_ not modelled 5.4 25 PDB header:transport protein Chain: B: PDB Molecule:periplasmic protein-probably involved in high-affinity fe2+ PDBTitle: crystal structure of copper-reconstituted fetp from uropathogenic2 escherichia coli strain f11 96 d1a9xa1 not modelled 5.4 63 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 97 c3ecqA_ not modelled 5.3 19 PDB header:hydrolase Chain: A: PDB Molecule:endo-alpha-n-acetylgalactosaminidase; PDBTitle: endo-alpha-n-acetylgalactosaminidase from streptococcus pneumoniae:2 semet structure 98 d1lnsa2 not modelled 5.3 9 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:PepX C-terminal domain-like 99 d2p0ma2 not modelled 5.3 40 Fold:Lipase/lipooxygenase domain (PLAT/LH2 domain) Superfamily:Lipase/lipooxygenase domain (PLAT/LH2 domain) Family:Lipoxigenase N-terminal domain

Binding site prediction

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If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0