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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3mn8A_

Fold library idPDB HeaderMoleculeTitle
c3mn8A_PDB header: hydrolaseChain: A: PDB Molecule: lp15968p;PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short


Added to library: Sun Aug 29 01:17:31 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KEDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIA
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Known secondary structure (DSSP)



GGGSS




STTT
TTS

S
TTS

TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence NMHGDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNA
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Known secondary structure (DSSP)
SSTT

TTT

S
S
TS
TT
SS

GGGTTTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence ANIDLNRDFPDRLEAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDR
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Known secondary structure (DSSP) T


GGG
S

TT



S
TTS



SS
S
S

SS

SBS




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFKQLAHTYSDNHPIMRKGNNCNDSFSGGITNGAHWYELSGGMQDFNYAFSNCFELTIELSCCKYPAAST
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Known secondary structure (DSSP) TSTTTTTS
GGG


GGGB

SS
SS


SSSS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVH
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Known secondary structure (DSSP) GGGSS
SSS
B
TT
TT
TTS


TT



S
 .........360.........370.........380...
Sequence ASAFGYQTSAPQQVRVTNDNQEALRLDFKLAPV
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Known secondary structure (DSSP) BTTB







SSS




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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