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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1h8lA_

Fold library idPDB HeaderMoleculeTitle
c1h8lA_PDB header: carboxypeptidaseChain: A: PDB Molecule: carboxypeptidase gp180 residues 503-882;PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa


Added to library: Tue Mar 16 12:16:15 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QAVQPVDFRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNM
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Known secondary structure (DSSP)







S



TTT
TT

SSSTT


TT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDL
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Known secondary structure (DSSP) STT

TTT

S
S
T

TT
SS

TTTS
TTS

G
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRNFPDQFFQVTDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQL
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Known secondary structure (DSSP) GG
S

SSS


S


S

SS
S

TT
SSS



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALSYSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEE
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Known secondary structure (DSSP) TTSTT
S
TTTSTT


GGG



S
SS
S
SS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPKYWEQNRRSLLQFIKQVHRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVT
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Known secondary structure (DSSP) GGG
TTT
SB
TT
TT

TTS


S
 .........360.........370.........380
Sequence ASARGYDPVTKTVEVDSKGGVQVNFTLSRT
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Known secondary structure (DSSP)
TTB


SS



B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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