PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3cu7A_

Fold library id	PDB Header	Molecule	Title
c3cu7A_	PDB header: immune system	Chain: A: PDB Molecule: complement c5;	PDBTitle: human complement component 5

Links to external resources
Added to library: Tue Mar 16 12:11:44 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E Q T Y V I S A P K I F R V G A S E N I V I Q V Y G Y T E A F D A T I S I K S Y P D K K F S Y S S G H V H L S S E N K F Q N S A I L T I Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S
B
T T S
B
B
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K Q L P G G Q N P V S Y V Y L E V V S K H F S K S K R M P I T Y D N G F L F I H T D K P V Y T P D Q S V K V R V Y S L N D D L K P A K R E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S
S
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L T F I D P E G S E V D M V E E I D H I G I I S F P D F K I P S N P R Y G M W T I K A K Y K E D F S T T G T A Y F E V K E Y V L P H F S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S S
S S
B S S S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S I E P E Y N F I G Y K N F K N F E I T I K A R Y F Y N K V V T E A D V Y I T F G I R E D L K D D Q K E M M Q T A M Q N T M L I N G I A Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S T T S S
T T T
S S
S S
S
S S
B
T T B

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence T F D S E T A V K E L S Y Y S L E D L N N K Y L Y I A V T V I E S T G G F S E E A E I P G I K Y V L S P Y K L N L V A T P L F L K P G I P Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T T S S
S T T
S S S S
S
S
B S
S
S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence P I K V Q V K D S L D Q L V G G V P V T L N A Q T I D V N Q E T S D L D P S K S V T R V D D G V A S F V L N L P S G V T V L E F N V K T D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
S
T T S
S S S
T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence P D L P E E N Q A R E G Y R A I A Y S S L S Q S Y L Y I D W T D N H K A L L V G E H L N I I V T P K S P Y I D K I T H Y N Y L I L S K G K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G S
T T S
S S S S B
T T
S
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence I H F G T R E K F S D A S Y Q S I N I P V T Q N M V P S S R L L V Y Y I V T G E Q T A E L V S D S V W L N I E E K C G N Q L Q V H L S P D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
G G G S S
S S S
B
S S
S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence D A Y S P G Q T V S L N M A T G M D S W V A L A A V D S A V Y G V Q R G A K K P L E R V F Q F L E K S D L G C G A G G G L N N A N V F H L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S B
T T
S S
B T T T T
S S
T T
S T T T T
S S S
S S S T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence G L T F L T N A N A D D S Q E N D E P C K E I L L Q K K I E E I A A K Y K H S V V K K C C Y D G A C V N N D E T C E Q R A A R I S L G P R C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
S S S
S
T G G G
S S G G G S
S S
T
S
T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence I K A F T E C C V V A S Q L R A N I S L G R L H M K T L L P V S K P E I R S Y F P E S W L W E V H L V P R R K Q L Q F A L P D S L T T W E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
B
S S
S S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence Q G I G I S N T G I C V A D T V K A K V F K D V F L E M N I P Y S V V R G E Q I Q L K G T V Y N Y R T S G M Q F C V K M S A V E G I C T S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
T T
S S S
B
T T
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence S P K C V R Q K V E G S S S H L V T F T V L P L E I G L H N I N F S L E T W F G K E I L V K T L R V V P E G V K R E S Y S G V T L D P R G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S S S
T T
S
B T T
T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence Y G T I S R R K E F P Y R I P L D L V P K T E I K R I L S V K G L L V G E I L S A V L S Q E G I N I L T H L P K G S A E A E L M S V V P V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
T T B
T T
S S T T S S S S
S S S
S
S S T T S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Y V F H Y L E T G N H W N I F H S D P L I E K Q K L K K K L K E G M L S I M S Y R N A D Y S Y S V W K G G S A S T W L T A F A L R V L G Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S S
G G G G B
T T S
B
S S S S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence N K Y V E Q N Q N S I C N S L L W L V E N Y Q L D N G S F K E N S Q Y Q P I K L Q G T L P V E A R E N S L Y L T A F T V I G I R K A F D I C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S B
T T S
B
S S
S
T G G G S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence P L V K I D T A L I K A D N F L L E N T L P A Q S T F T L A I S A Y A L S L G D K T H P Q F R S I V S A L K R E A L V K G N P P I Y R F W K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
T T S
T T
T T T T S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence D N L Q H K D S S V P N T G T A R M V E T T A Y A L L T S L N L K D I N Y V N P V I K W L S E E Q R Y G G G F Y S T Q D T I N A I E G L T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S
S
T T
S
S S S
S T T T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence Y S L L V K Q L R L S M D I D V S Y K H K G A L H N Y K M T D K N F L G R P V E V L L N D D L I V S T G F G S G L A T V H V T T V V H K T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
S S S
S
S S S
S
S
B S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence T S E E V C S F Y L K I D T Q D I Y K R I V A C A S Y K P S R E E S S S G S S H A V M D I S L P T G I S A N E E D L K A L V E G V D Q L F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
T T
S S
S
T T
S S T T
S
S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence D Y Q I K D G H V I L Q L N S I P S S D F L C V R F R I F E L F E V G F L S P A T F T V Y E Y H R P D K Q C T M F Y S T S N I K I Q K V C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T S
S S S
S S
S S
T T
S
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence G A A C K C V E A D C G Q M Q E E L D L T I S A E T R K Q T A C K P E I A Y A Y K V S I T S I T V E N V F V K Y K A T L L D I Y K T G E A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S
S
S
S S T T T S T T
S S S
T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence A E K D S E I T F I K K V T C T N A E L V K G R Q Y L I M G K E A L Q I K Y N F S F R Y I Y P L D S L T W I E Y W P R D T T C S S C Q A F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
S S
S
S S
B
S S
B
S S S S S S S

. . . . . . . . . 1620 . . . . .

Sequence A N L D E F A E D I F L N G C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	Q	T	Y	V	I	S	A	P	K	I	F	R	V	G	A	S	E	N	I	V	I	Q	V	Y	G	Y	T	E	A	F	D	A	T	I	S	I	K	S	Y	P	D	K	K	F	S	Y	S	S	G	H	V	H	L	S	S	E	N	K	F	Q	N	S	A	I	L	T	I	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S			T	T													S			B									T	T						S				B			B		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Q	L	P	G	G	Q	N	P	V	S	Y	V	Y	L	E	V	V	S	K	H	F	S	K	S	K	R	M	P	I	T	Y	D	N	G	F	L	F	I	H	T	D	K	P	V	Y	T	P	D	Q	S	V	K	V	R	V	Y	S	L	N	D	D	L	K	P	A	K	R	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S														S	S														S							S		S				T	T												T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	T	F	I	D	P	E	G	S	E	V	D	M	V	E	E	I	D	H	I	G	I	I	S	F	P	D	F	K	I	P	S	N	P	R	Y	G	M	W	T	I	K	A	K	Y	K	E	D	F	S	T	T	G	T	A	Y	F	E	V	K	E	Y	V	L	P	H	F	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T											S	S	S											S	S												B	S	S	S																		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	I	E	P	E	Y	N	F	I	G	Y	K	N	F	K	N	F	E	I	T	I	K	A	R	Y	F	Y	N	K	V	V	T	E	A	D	V	Y	I	T	F	G	I	R	E	D	L	K	D	D	Q	K	E	M	M	Q	T	A	M	Q	N	T	M	L	I	N	G	I	A	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S				S	T	T	S	S											T	T	T				S												S		S	S		S						S	S			B						T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	F	D	S	E	T	A	V	K	E	L	S	Y	Y	S	L	E	D	L	N	N	K	Y	L	Y	I	A	V	T	V	I	E	S	T	G	G	F	S	E	E	A	E	I	P	G	I	K	Y	V	L	S	P	Y	K	L	N	L	V	A	T	P	L	F	L	K	P	G	I	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	T	T	T	T	S	S				S	T	T			S											S	S	S															S		S						B	S			S				S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	I	K	V	Q	V	K	D	S	L	D	Q	L	V	G	G	V	P	V	T	L	N	A	Q	T	I	D	V	N	Q	E	T	S	D	L	D	P	S	K	S	V	T	R	V	D	D	G	V	A	S	F	V	L	N	L	P	S	G	V	T	V	L	E	F	N	V	K	T	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			B			S												T	T	S														S	S	S											T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	D	L	P	E	E	N	Q	A	R	E	G	Y	R	A	I	A	Y	S	S	L	S	Q	S	Y	L	Y	I	D	W	T	D	N	H	K	A	L	L	V	G	E	H	L	N	I	I	V	T	P	K	S	P	Y	I	D	K	I	T	H	Y	N	Y	L	I	L	S	K	G	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		G	G	G	S													T	T	S										S	S	S	S	B		T	T													S														T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	H	F	G	T	R	E	K	F	S	D	A	S	Y	Q	S	I	N	I	P	V	T	Q	N	M	V	P	S	S	R	L	L	V	Y	Y	I	V	T	G	E	Q	T	A	E	L	V	S	D	S	V	W	L	N	I	E	E	K	C	G	N	Q	L	Q	V	H	L	S	P	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S	S	S										G	G	G	S	S													S	S	S												B					S	S							S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	A	Y	S	P	G	Q	T	V	S	L	N	M	A	T	G	M	D	S	W	V	A	L	A	A	V	D	S	A	V	Y	G	V	Q	R	G	A	K	K	P	L	E	R	V	F	Q	F	L	E	K	S	D	L	G	C	G	A	G	G	G	L	N	N	A	N	V	F	H	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B		T	T										S	S								B			T	T	T	T		S	S			T	T		S								T	T	T	T					S	S	S			S	S	S							T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	L	T	F	L	T	N	A	N	A	D	D	S	Q	E	N	D	E	P	C	K	E	I	L	L	Q	K	K	I	E	E	I	A	A	K	Y	K	H	S	V	V	K	K	C	C	Y	D	G	A	C	V	N	N	D	E	T	C	E	Q	R	A	A	R	I	S	L	G	P	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S	S	S					S	S	S						S									T	G	G	G			S	S									G	G	G	S				S	S								T			S		T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	K	A	F	T	E	C	C	V	V	A	S	Q	L	R	A	N	I	S	L	G	R	L	H	M	K	T	L	L	P	V	S	K	P	E	I	R	S	Y	F	P	E	S	W	L	W	E	V	H	L	V	P	R	R	K	Q	L	Q	F	A	L	P	D	S	L	T	T	W	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T														T	T					S							B								S	S										S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	G	I	G	I	S	N	T	G	I	C	V	A	D	T	V	K	A	K	V	F	K	D	V	F	L	E	M	N	I	P	Y	S	V	V	R	G	E	Q	I	Q	L	K	G	T	V	Y	N	Y	R	T	S	G	M	Q	F	C	V	K	M	S	A	V	E	G	I	C	T	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T															S									S				T	T													S	S	S		B										T	T				S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	P	K	C	V	R	Q	K	V	E	G	S	S	S	H	L	V	T	F	T	V	L	P	L	E	I	G	L	H	N	I	N	F	S	L	E	T	W	F	G	K	E	I	L	V	K	T	L	R	V	V	P	E	G	V	K	R	E	S	Y	S	G	V	T	L	D	P	R	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B		T	T													S	S	S											T	T														S													B	T	T		T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	Y	G	T	I	S	R	R	K	E	F	P	Y	R	I	P	L	D	L	V	P	K	T	E	I	K	R	I	L	S	V	K	G	L	L	V	G	E	I	L	S	A	V	L	S	Q	E	G	I	N	I	L	T	H	L	P	K	G	S	A	E	A	E	L	M	S	V	V	P	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		B											T	T	B		T	T											S	S	T	T									S	S	S	S				S	S	S			S		S	S					T	T	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Y	V	F	H	Y	L	E	T	G	N	H	W	N	I	F	H	S	D	P	L	I	E	K	Q	K	L	K	K	K	L	K	E	G	M	L	S	I	M	S	Y	R	N	A	D	Y	S	Y	S	V	W	K	G	G	S	A	S	T	W	L	T	A	F	A	L	R	V	L	G	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		G	G	G		S	S																				G	G	G	G	B		T	T	S		B		S	S	S	S	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	N	K	Y	V	E	Q	N	Q	N	S	I	C	N	S	L	L	W	L	V	E	N	Y	Q	L	D	N	G	S	F	K	E	N	S	Q	Y	Q	P	I	K	L	Q	G	T	L	P	V	E	A	R	E	N	S	L	Y	L	T	A	F	T	V	I	G	I	R	K	A	F	D	I	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																		S	B		T	T	S		B				S	S								S																								T	G	G	G	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	P	L	V	K	I	D	T	A	L	I	K	A	D	N	F	L	L	E	N	T	L	P	A	Q	S	T	F	T	L	A	I	S	A	Y	A	L	S	L	G	D	K	T	H	P	Q	F	R	S	I	V	S	A	L	K	R	E	A	L	V	K	G	N	P	P	I	Y	R	F	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S		S													T	T	S		T	T																			T	T	T	T	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	D	N	L	Q	H	K	D	S	S	V	P	N	T	G	T	A	R	M	V	E	T	T	A	Y	A	L	L	T	S	L	N	L	K	D	I	N	Y	V	N	P	V	I	K	W	L	S	E	E	Q	R	Y	G	G	G	F	Y	S	T	Q	D	T	I	N	A	I	E	G	L	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S			S	S				S																				T	T																S		S	S	S			S	T	T	T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	Y	S	L	L	V	K	Q	L	R	L	S	M	D	I	D	V	S	Y	K	H	K	G	A	L	H	N	Y	K	M	T	D	K	N	F	L	G	R	P	V	E	V	L	L	N	D	D	L	I	V	S	T	G	F	G	S	G	L	A	T	V	H	V	T	T	V	V	H	K	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S														S	S	S										S	S	S		S								S	S	S								S			S												B	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	T	S	E	E	V	C	S	F	Y	L	K	I	D	T	Q	D	I	Y	K	R	I	V	A	C	A	S	Y	K	P	S	R	E	E	S	S	S	G	S	S	H	A	V	M	D	I	S	L	P	T	G	I	S	A	N	E	E	D	L	K	A	L	V	E	G	V	D	Q	L	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			S																								T	T			S	S				S									T	T													S	S	T	T		S		S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	D	Y	Q	I	K	D	G	H	V	I	L	Q	L	N	S	I	P	S	S	D	F	L	C	V	R	F	R	I	F	E	L	F	E	V	G	F	L	S	P	A	T	F	T	V	Y	E	Y	H	R	P	D	K	Q	C	T	M	F	Y	S	T	S	N	I	K	I	Q	K	V	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					T	T							S				S	S	S											S	S			S	S											T	T												S										S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	G	A	A	C	K	C	V	E	A	D	C	G	Q	M	Q	E	E	L	D	L	T	I	S	A	E	T	R	K	Q	T	A	C	K	P	E	I	A	Y	A	Y	K	V	S	I	T	S	I	T	V	E	N	V	F	V	K	Y	K	A	T	L	L	D	I	Y	K	T	G	E	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S		S							S					S		S	S	T	T	T					S	T	T															S	S	S																T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	A	E	K	D	S	E	I	T	F	I	K	K	V	T	C	T	N	A	E	L	V	K	G	R	Q	Y	L	I	M	G	K	E	A	L	Q	I	K	Y	N	F	S	F	R	Y	I	Y	P	L	D	S	L	T	W	I	E	Y	W	P	R	D	T	T	C	S	S	C	Q	A	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									T	T		T	T					S	S								S								S	S						B				S	S				B				S	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.
Sequence	A	N	L	D	E	F	A	E	D	I	F	L	N	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T							T	T	S