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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2zxqA_

Fold library idPDB HeaderMoleculeTitle
c2zxqA_PDB header: hydrolaseChain: A: PDB Molecule: endo-alpha-n-acetylgalactosaminidase;PDBTitle: crystal structure of endo-alpha-n-acetylgalactosaminidase2 from bifidobacterium longum (engbf)


Added to library: Sat Aug 28 19:28:20 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASETLKTKKMEVQIKKNFPSVLQYTMTDGKVMYGQSKDVRTVEINGTNIELGDDDVTFKKVSDTEATYTL
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Known secondary structure (DSSP)

SSSSSS
TTS



S


TT

GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVKDEAKKIDAVITVQITVKANQLHLNVTKIKNNLSEGIPEGNGVEENAIQTLSFPNQSLVSVRSSQENA
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Known secondary structure (DSSP) GGGTTTTT




TTT


TT



TT

STTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QFTGARMSSNTQKPGDTNFAVTEDTNVTDSDYTYGFISGAGLSAGLWSNSEHDGTYVAAPVRGGSQNTRV
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Known secondary structure (DSSP)

B

TTS



TT


SSSTT



B


SB
S

TTTTB

 .........220.........230.........240.........250.........260.........270.........280
Sequence YATTQQTGDATSLGLASAPWYYHRTVTDSKGKKYTVAETALPQMAVAIAGDENEDGAVNWQDGAIAYRDI
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Known secondary structure (DSSP) TT

SS
TTS


SS

SSTT
SS

STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MNNPYKSEEVPELVAWRIAMNFGSQAQNPFLTTLDNVKKVALNTDGLGQSVLLKGYGNEGHDSGHPDYGD
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Known secondary structure (DSSP) S


TTGGGGGG



TT

SS
TS

T
BTTSTTSSTT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IGQRLGGADDMNTMMEEGSKYGARFGVHVNASEMYPEAKAFSEDMVRRNSAGGLSYGWNWLDQGVGIDGI
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Known secondary structure (DSSP) B
GGGTTTT
SS
TTSTT

TTTB
B
TTS
B
SSSB
 .........430.........440.........450.........460.........470.........480.........490
Sequence YDLASGSRVSRFADLSKEVGDNMDFIYLDVWGNLTSSGSEDSWETRKMSKMINDNGWRMTTEWGSGNEYD
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Known secondary structure (DSSP) TSTT



STTSSSS
S


TTT
SSTTS
TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence STFQHWAADLTYGGYTSKGENSEVMRFLRNHQKDSWVGDYPQYGGAANAPLLGGYNMKDFEGWQGRNDYA
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Known secondary structure (DSSP)
SBBSTTSS
TTSSS


GGG
B
S



GGG
GGGS

TT







BSGGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence AYIKNLYTHDVSTKFIQHFKVTRWVNNPLLTADNGNAAAVSDPNTNNGNEQITLKDSNGNVVVVSRGSND
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Known secondary structure (DSSP) TTS

TT

TTTT
TTS


TTSGGGS

TT

S
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence TSSAAYRQRTITFNGVKVASGVVSAGDGSATGDESYLLPWMWDSFTGKLVKDSEQKLYHWNTKGGTTTWT
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Known secondary structure (DSSP) TTSGGGG
TT



TTSS





B
SSS

B

GGG
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence LPDSWKNLSSVKVYQLTDQGKTNEQTVAVSGGKVTLTADAETPYVVYKGEAKQIQVNWSEGMHVVDAGFN
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Known secondary structure (DSSP)

GGGTT
STT
BTT
TT

SS







TTTTSSSS
TT

 .........780.........790.........800.........810.........820.........830.........840
Sequence GGSNTLTDNWTVSGSGKAEVEGDNNAMLRLTGKVDVSQRLTDLKAGQKYALYVGVDNRSTGDASVTVTSG
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Known secondary structure (DSSP) S
TTTSSSS
SSS
SS

S

TT

SSS
T
 .........850.........860.........870.........880.........890.........900.........910
Sequence GKVLATNSTGKSIAKNYIKAYGHNTNSNTENGSSYFQNMYVFFTAPENGDATVTLSHKSTDGAHTYFDDV
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Known secondary structure (DSSP) TSS





BTTSTT
TTS
SBTTB




TT



S

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence RIVENQYSGITYEKDGTLKSLTNGFENNAQGIWPFVVSGSEGVEDNRIHLSELHAPFTRAGWDVKKMDDV
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Known secondary structure (DSSP)





TTSS
SSS
SSTTTT
STTSSBS
S

TTTTSTTSTT

S
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LDGTWSVKVNGLTQKGTLVYQTIPQNVKFEAGAKYKVSFDYQSGSDDIYAIAVGQGEYSAGSVKLTNLKK
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Known secondary structure (DSSP) SSSS
S
TT


TTTS


BT
SSTTSSS

TTSS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ALGETGKAEFELTGGVNGDSWFGIYSTATAPDLQGSTGNAQDFGGYKDFVLDNLKIERIESQTRTKAEAQ
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Known secondary structure (DSSP) B
TTS

S




TT

TTS
TT







 .........1130.........1140.........1150.........1160.........1170........
Sequence DKVKEIRGKYDSKRAWQQYQDTLVKARVLINKNGATAEDFTKAYDILVALDEYMKTAP
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Known secondary structure (DSSP) SS



STT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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