Fold library entry viewer: c1t3qB_

Added to library: Tue Mar 16 13:27:01 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	M	K	H	E	V	V	A	L	K	K	K	S	I	G	T	S	V	L	R	R	E	D	T	R	L	L	T	G	R	G	R	Y	I	A	D	L	V	L	S	G	M	L	H	V	A	S	L	R	S	P	F	A	H	A	R	I	V	S	I	D	V	A	D	A	Q	A	L	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G								S	S	T	T	S					T	T						T	T				B	G	G	G				T	T										S	S	S	S														S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	E	L	V	W	C	G	A	D	V	A	E	L	S	Q	G	I	V	A	T	M	Q	V	E	G	F	Q	T	T	I	Q	P	L	L	A	N	G	V	T	R	F	V	G	E	I	V	A	V	V	V	A	S	S	R	A	I	A	E	D	A	A	Q	L	I	Q	V	E	Y	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T									S	S	T	T								S	S			S				S	T	T									S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	P	A	V	T	G	I	E	A	A	L	E	G	E	A	R	A	N	D	T	L	A	G	N	V	V	S	R	T	S	R	A	R	D	E	L	A	P	I	F	A	S	S	A	G	V	V	R	G	Q	F	S	C	G	R	V	S	A	C	P	M	E	T	R	G	A	V	A	Q	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S								S			S		T	T	S	S	S	S																			S	S											B	B					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	W	T	T	Q	Q	L	I	L	W	T	A	T	Q	M	P	S	F	V	R	T	M	V	A	M	F	C	A	I	P	E	H	L	I	E	V	R	V	P	D	V	G	G	G	F	G	Q	K	A	H	L	H	P	E	E	L	L	V	C	L	L	S	R	A	L	G	R	P	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T									S														T			G	G	G							B		S			T	T	T	T	S	S																T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	W	I	E	D	R	Q	E	N	F	L	G	A	T	H	A	K	Q	Q	R	N	E	M	G	L	A	F	D	G	D	G	R	F	L	A	L	E	N	R	S	I	T	D	G	G	A	Y	N	N	L	P	W	T	Q	L	V	E	S	H	V	G	N	A	V	I	L	G	V	Y	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		B	B													T	T																S	S			T	T	T		G	G	G	T							T	T	T	T	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	A	V	S	E	E	S	I	A	V	A	T	N	K	C	P	I	G	A	Y	R	G	V	G	F	T	A	G	Q	I	A	R	E	T	L	I	D	R	A	A	R	Q	L	G	L	S	P	F	E	I	R	R	R	N	V	V	M	P	E	D	F	P	F	T	N	R	L	G	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S	S		B				T	T	T	T																				T									T	T	B			G	G	G		S				T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	R	E	G	T	Y	L	Q	T	I	N	L	L	E	E	M	V	N	P	E	A	F	R	Q	R	Q	A	E	A	R	A	R	G	K	Y	L	G	L	G	V	S	V	F	N	E	V	T	G	T	G	T	R	T	L	S	F	L	G	T	P	T	T	T	H	D	S	A	T	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																												T	T	T															S									T	T							B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	D	P	T	G	K	V	T	V	T	T	S	L	A	S	S	G	Q	G	H	E	T	T	L	A	Q	I	A	A	D	V	L	G	V	P	A	S	D	V	V	I	Q	A	G	S	T	K	N	T	Y	G	F	G	A	Y	A	S	R	G	A	V	I	G	A	G	S	I	G	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S							S				S	S	S															T	S		G	G	G						S	B	T	T	S			B			S		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	S	I	V	R	E	R	V	K	Q	L	A	G	H	L	L	E	A	A	S	E	D	I	V	I	E	D	G	L	V	H	V	A	G	V	P	A	K	G	M	P	F	A	E	V	V	G	A	A	Y	F	A	D	A	T	H	P	P	G	F	D	A	T	L	E	A	T	A	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S		G	G	G					T	T					T	T																			G	G	G			T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	P	S	D	L	V	L	A	N	G	G	H	A	A	I	V	E	I	D	A	S	T	Y	A	T	R	V	T	D	F	F	A	V	E	D	C	G	T	M	I	N	P	M	I	V	E	G	Q	I	R	G	G	I	A	Q	A	I	G	Q	T	L	L	E	E	V	I	Y	D	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																T	T	T															B	S		S																						T			B		B		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	Q	L	V	T	T	T	L	M	D	Y	L	I	P	T	T	L	D	V	P	D	I	R	I	R	H	L	E	T	P	S	P	L	V	P	G	G	I	K	G	M	G	E	S	A	M	I	S	A	P	A	A	V	V	A	A	V	N	D	A	L	A	H	L	E	V	V	I	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B				S	T	T	T	S					T	T	T														T	T	S	G	G	G	B				T	T																			G	G	G	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Sequence	V	P	I	T	P	E	R	I	F	R	S	I	Q	E	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S												T

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PDB structure

FASTA sequence

Hidden Markov model

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