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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2zxcA_

Fold library idPDB HeaderMoleculeTitle
c2zxcA_PDB header: hydrolaseChain: A: PDB Molecule: neutral ceramidase;PDBTitle: seramidase complexed with c2


Added to library: Tue Mar 16 12:29:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVH
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Known secondary structure (DSSP)

S



SSS

SS
SS

TTTTSSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LKVLARLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARL
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Known secondary structure (DSSP) STTT
SGGG

BSB



SSGGGTB

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPGRLFYGSGELRNASRNRSLLSHLKNPDIAGYEDGIDPQMSVLSFVDANGELAGAISWFPVHSTSMTNA
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Known secondary structure (DSSP)

SS
TTTT
TT
TT
TTS


TTS




B
SS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPNLNLKPGSGPFDNEFDNTREIGLRQFAKAY
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Known secondary structure (DSSP)

SBB
TTT

SSS

SS
TTS
SSSSS
SSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence EIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLEEGNNPF
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Known secondary structure (DSSP) T

S

TT

GGGTTSS









SS
SSSSS
SS


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LSALGGLLTGVPPQELVQCQAEKTILADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIR
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Known secondary structure (DSSP) T
S

S


TTT



TT
SSS
SS
STTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence RAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDMAVALRERLP
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Known secondary structure (DSSP) GGGT

SBSS




T
T
TT
TTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence VETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLE
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Known secondary structure (DSSP)









TTS

B
S







STT

TT



STT


GGG


TTS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VVNIGKDGKQTPVTVATDNDWDTQYRWERVGISASKATISWSIPPGTEPGHYYIRHYGNAKNFWTQKISE
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Known secondary structure (DSSP)

SSS
S

TTSTTTTT

TT

S
TTT

 .........640...
Sequence IGGSTRSFEVLGT
Predicted secondary structure



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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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