Fold library entry viewer: c2ww8A_

Added to library: Sat Aug 28 17:18:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	G	K	V	V	I	K	E	T	G	E	G	G	A	L	L	G	D	A	V	F	E	L	K	N	N	T	D	G	T	T	V	S	Q	R	T	E	A	Q	T	G	E	A	I	F	S	N	I	K	P	G	T	Y	T	L	T	E	A	Q	P	P	V	G	Y	K	P	S	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T		B											T	T	T										T	T	T										S												T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	W	T	V	E	V	E	K	N	G	R	T	T	V	Q	G	E	Q	V	E	N	R	E	E	A	L	S	D	Q	Y	P	Q	T	G	T	Y	P	D	V	Q	T	P	Y	Q	I	I	K	V	D	G	S	E	K	N	G	Q	H	K	A	L	N	P	N	P	Y	E	R	V	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T						T	T												S									T	T	T										T	T				T	T			S						S	S					T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	G	T	L	S	K	R	I	Y	Q	V	N	N	L	D	D	N	Q	Y	G	I	E	L	T	V	S	G	K	T	V	Y	E	Q	K	D	K	S	V	P	L	D	V	V	I	L	L	D	N	S	N	S	M	S	N	I	R	N	K	N	A	R	R	A	E	R	A	G	E	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													T	T	T	T										B							S	S	T	T													G	G	G		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	S	L	I	D	K	I	T	S	D	S	E	N	R	V	A	L	V	T	Y	A	S	T	I	F	D	G	T	E	F	T	V	E	K	G	V	A	D	K	N	G	K	R	L	N	D	S	L	F	W	N	Y	D	Q	T	S	F	T	T	N	T	K	D	Y	S	Y	L	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	T	T									S	S	S	B		B	S												T	T								T	T	S		T	T										B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	D	K	N	D	I	V	E	L	K	N	K	V	P	T	E	A	E	D	H	D	G	N	R	L	M	Y	Q	F	G	A	T	F	T	Q	K	A	L	M	K	A	D	E	I	L	T	Q	Q	A	R	Q	N	S	Q	K	V	I	F	H	I	T	D	G	V	P	T	M	S	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		S					S		T	T	S	G	G	G	G	G		S																		S		S	S	S									S	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	N	F	N	H	A	T	F	A	P	S	Y	Q	N	Q	L	N	A	F	F	S	K	S	P	N	K	D	G	I	L	L	S	D	F	I	T	Q	A	T	S	G	E	H	T	I	V	R	G	D	G	Q	S	Y	Q	M	F	T	D	K	T	V	Y	E	K	G	A	P	A	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					S	T	T														T	S	T	T	S	S	S			G	G	G	B					T	T		G	G	G	T					S	S		S	B		B	S	S		B				T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	V	K	P	E	K	Y	S	E	M	K	A	A	G	Y	A	V	I	G	D	P	I	N	G	G	Y	I	W	L	N	W	R	E	S	I	L	A	Y	P	F	N	S	N	T	A	K	I	T	N	H	G	D	P	T	R	W	Y	Y	N	G	N	I	A	P	D	G	Y	D	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							T	T	T										G	G	G	B		B	S	T	T		S	S			B		B	S												T	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	G	I	G	I	N	G	D	P	G	T	D	E	A	T	A	T	S	F	M	Q	S	I	S	S	K	P	E	N	Y	T	N	V	T	D	T	T	K	I	L	E	Q	L	N	R	Y	F	H	T	I	V	T	E	K	K	S	I	E	N	G	T	I	T	D	P	M	G	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				T	T	T	S												T	S	S	S	G	G	G					S	S	G	G	G										T	T	T						S										B		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	D	L	Q	L	G	T	D	G	R	F	D	P	A	D	Y	T	L	T	A	N	D	G	S	R	L	E	N	G	Q	A	V	G	G	P	Q	N	D	G	G	L	L	K	N	A	K	V	L	Y	D	T	T	E	K	R	I	R	V	T	G	L	Y	L	G	T	D	E	K	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	S			G	G	G						T	T	S					T	T					T	T	T	T	S		G	G	G	T	T							T	T	T	T											B	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	T	Y	N	V	R	L	N	D	E	F	V	S	N	K	F	Y	D	T	N	G	R	T	T	L	H	P	K	E	V	E	Q	N	T	V	R	D	F	P	I	P	K	I	R	D	V	R	K	Y	P	E	I	T	I	S	K	E	K	K	L	G	D	I	E	F	I	K	V	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			T	T					S	B	S	S					S	B	T	T		T	T																									B												T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	D	K	K	P	L	R	G	A	V	F	S	L	Q	K	Q	H	P	D	Y	P	D	I	Y	G	A	I	D	Q	N	G	T	Y	Q	N	V	R	T	G	E	D	G	K	L	T	F	K	N	L	S	D	G	K	Y	R	L	F	E	N	S	E	P	A	G	Y	K	P	V	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B		S	S										S	S		S	S					S	S	S	S		T	T	S	S					T	T										S												T	T	B
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
Sequence	K	P	I	V	A	F	Q	I	V	N	G	E	V	R	D	V	T	S	I	V	P	Q	D	I	P	A	G	Y	E	F	T	N	D	K	H	Y	I	T	N	E	P	I	P	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T											T	T		S							T	T								B

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PDB structure

FASTA sequence

Hidden Markov model

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