Fold library entry viewer: c3rpkA_

Added to library: Sat Jun 18 22:06:19 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	T	S	V	T	V	H	K	L	L	A	T	D	G	D	X	D	K	I	A	N	E	L	A	G	N	K	V	G	V	L	P	A	N	A	K	E	I	A	G	V	X	F	V	W	T	N	T	N	N	E	I	I	D	E	N	G	Q	T	L	G	V	N	I	D	P	Q	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T								T			B	S			S	S			S	S					B	S								T	T	S					T	T	S							B		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	S	G	A	X	P	A	T	A	X	K	K	L	T	E	A	E	G	A	K	F	N	T	A	N	L	P	A	A	K	Y	K	I	Y	E	I	H	S	L	S	T	Y	V	G	E	D	G	A	T	L	T	G	S	K	A	V	P	I	E	I	E	L	P	L	N	D	V	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S	S	S			T	T	S							T	T							T	T			S									G	G	G				B		T	T	S		B						B								S		T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	H	V	Y	P	K	N	T	E	A	K	P	K	I	D	K	D	F	K	G	K	A	N	P	D	T	P	R	V	D	K	D	T	P	V	N	H	Q	V	G	D	V	V	E	Y	E	I	V	T	K	I	P	A	L	A	N	Y	A	T	A	N	W	S	D	R	X	T	E	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B												T	T	T			S	S	S			S		T	T	S						T	T													T	T				S										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	F	N	K	G	T	V	K	V	T	V	D	D	V	A	L	E	A	G	D	Y	A	L	T	E	V	A	T	G	F	D	L	K	L	T	D	A	G	L	A	K	V	N	D	Q	N	A	E	K	T	V	K	I	T	Y	S	A	T	L	N	D	K	A	I	V	E	V	P	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							T	T					T	T	S							S	S													T	T	T	T		S	S														T	T			T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	D	V	T	F	N	Y	G	N	N	P	D	H	G	N	T	P	K	P	N	K	P	N	E	N	G	D	L	T	L	T	K	T	W	V	D	A	T	G	A	P	I	P	A	G	A	E	A	T	F	D	L	V	N	A	Q	T	G	K	V	V	Q	T	V	T	L	T	T	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S										B				T	T	S											T	T			B					S									T	T	T											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	T	V	T	V	N	G	L	D	K	N	T	E	Y	K	F	V	E	R	S	I	K	G	Y	S	A	D	Y	Q	E	I	T	T	A	G	E	I	A	V	K	N	W	K	D	E	N	P	K	P	L	D	P	T	E	P	K	V	V	T	Y	G	K	K	F	V	K	V	N	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			T	T	S									B	T	T	B									S	T	T															B																			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	N	R	L	A	G	A	E	F	V	I	A	N	A	D	N	A	G	Q	Y	L	A	R	K	A	D	K	V	S	Q	E	E	K	Q	L	V	V	T	T	K	D	A	L	D	R	A	V	A	A	Y	N	A	L	T	A	Q	Q	Q	T	Q	Q	E	K	E	K	V	D	K	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S								S		S	S	S								T	T	T	S																									S		T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	Y	N	A	A	V	I	A	A	N	N	A	F	E	W	V	A	D	K	D	N	E	N	V	V	K	L	V	S	D	A	Q	G	R	F	E	I	T	G	L	L	A	G	T	Y	Y	L	E	E	T	K	Q	P	A	G	Y	A	L	L	T	S	R	Q	K	F	E	V	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S					S		T	T		T	T	B							T	T										S												T	T	B				S	S								T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Sequence	T	S	Y	S	A	T	G	Q	G	I	E	Y	T	A	G	S	G	K	D	D	A	T	K	V	V	N	K	K	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		S		S	S	B		S	S	S	S						B							B

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PDB structure

FASTA sequence

Hidden Markov model

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