Fold library entry viewer: d1rm6a2

Added to library: Tue Mar 16 13:04:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	P	K	A	A	M	K	A	G	A	I	A	L	H	D	D	K	P	N	N	I	L	R	E	V	H	A	E	F	G	D	V	A	A	A	F	A	E	A	D	L	I	R	E	K	T	Y	T	F	A	E	V	N	H	V	H	M	E	L	N	A	T	L	A	E	Y	D	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T				S	S	T	T		T	T	S										S								T		S												B					S	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	D	M	L	T	L	N	T	T	T	Q	V	P	Y	Y	V	H	L	K	V	A	A	C	L	Q	M	D	S	A	R	I	R	V	I	K	P	F	L	G	G	G	F	G	A	R	T	E	A	L	H	F	E	I	I	A	G	L	L	A	R	K	A	K	G	T	V	R	L	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									S														T			G	G	G							S					T	T	T	T	S	S																T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	R	E	E	T	F	I	A	H	R	G	R	P	W	T	E	V	K	M	K	I	G	L	K	K	D	G	K	I	A	A	L	A	L	E	A	T	Q	A	G	G	A	Y	A	G	Y	G	I	I	T	I	L	Y	T	G	A	L	M	H	G	L	Y	H	I	P	A	I	K	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B													T	T	S															S	S		T	T											T	T	S	S	S	B			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	W	R	V	Y	T	N	T	P	P	C	G	A	M	R	G	H	G	T	V	D	T	R	A	A	F	E	A	L	L	T	E	M	G	E	E	L	G	I	D	S	L	K	I	R	Q	I	N	M	L	P	Q	I	P	Y	V	T	M	Y	A	Q	R	V	M	S	Y	G	V	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S						S	S	T	T	T																			T										T	B		S	S	S	S				T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	L	E	K	V	K	A	A	S	G	W	E	E	R	K	G	K	L	P	K	G	R	G	L	G	I	A	L	S	H	F	V	S	G	T	S	T	P	K	H	W	T	G	E	P	H	A	T	V	N	L	K	L	D	F	D	G	G	I	T	L	L	T	G	A	A	D	I	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T					T	T		S		T	T												S	S		S	S		S	S						S									T	T												S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	S	N	T	M	A	S	Q	V	A	A	E	V	L	G	V	R	L	S	R	I	R	V	I	S	A	D	S	A	L	T	P	K	D	N	G	S	Y	S	S	R	V	T	F	M	V	G	N	A	S	I	S	A	A	E	E	L	K	G	V	L	V	K	A	A	A	K	K	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T			G	G	G						S	B	T	T	T	S						S		T	T																													T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	R	E	E	D	I	E	V	I	D	E	M	F	M	V	S	G	S	Q	D	P	G	L	S	F	Q	E	V	V	K	A	A	M	V	D	S	G	T	I	T	V	K	G	T	Y	T	C	P	T	E	F	Q	G	D	K	K	I	R	G	S	A	I	G	A	T	M	G	F	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G					T	T					T	T		S	S														T	T	T		S											G	G	G	S			T	T		G	G	G	G	T	T			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	Q	V	V	E	A	S	V	D	E	I	T	G	K	V	T	A	H	K	V	W	V	A	V	D	V	G	K	A	L	N	P	L	A	V	E	G	Q	T	Q	G	G	V	W	M	G	M	G	Q	A	L	S	E	E	T	V	Y	D	N	G	R	M	V	H	G	N	I	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T															S	S		S	S																					T							T	T			S			S	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	R	V	P	T	I	V	E	S	P	D	I	E	V	I	I	V	E	S	M	D	P	N	G	P	F	G	A	K	E	A	S	E	G	M	L	A	G	F	L	P	A	I	H	E	A	V	Y	E	A	V	G	V	R	A	T	D	F	P	L	S	P	D	R	I	T	E	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	T														T	T	S	G	G	G					S	S	T	T	T	T	T														S							S
	.	.	.	.	.	.
Sequence	A	K	E	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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