Email l.a.kelley@imperial.ac.uk Description P0A8R4 Date Wed Jan 25 15:20:19 GMT 2012 Unique Job ID 132be2e98061005b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3efgA_ 98.1 41 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein slyx homolog; PDBTitle: structure of slyx protein from xanthomonas campestris pv. campestris2 str. atcc 33913 2 c3m06F_ 93.3 27 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 3 c2xdjF_ 92.0 14 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 4 c1gd2G_ 89.2 17 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 5 c3a7pB_ 88.9 22 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 6 c1m1jA_ 87.2 24 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands 7 c2ykqC_ 87.2 21 PDB header:rna-binding protein Chain: C: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p trimer 8 c1deqD_ 86.0 19 PDB header: PDB COMPND: 9 c1deqF_ 83.7 15 PDB header: PDB COMPND: 10 c1deqO_ 82.8 7 PDB header: PDB COMPND: 11 c2wt7B_ 81.5 17 PDB header:transcription Chain: B: PDB Molecule:transcription factor mafb; PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna 12 c1t2kD_ 81.1 24 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 13 c1zxaB_ 80.6 38 PDB header:transferase Chain: B: PDB Molecule:cgmp-dependent protein kinase 1, alpha isozyme; PDBTitle: solution structure of the coiled-coil domain of cgmp-2 dependent protein kinase ia 14 c3ghgK_ 80.4 8 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 15 c1ei3E_ 79.7 12 PDB header: PDB COMPND: 16 c3m0dC_ 79.6 30 PDB header:signaling protein Chain: C: PDB Molecule:tnf receptor-associated factor 1; PDBTitle: crystal structure of the traf1:traf2:ciap2 complex 17 c3movB_ 76.7 25 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 18 c1fosF_ 73.6 24 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 19 c1ci6A_ 73.5 20 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 20 c3m9bK_ 73.1 29 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 21 c1aq5C_ not modelled 72.6 20 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 22 c1n73A_ not modelled 72.6 18 PDB header:blood clotting Chain: A: PDB Molecule:fibrin alpha-1 chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 23 c2hpcF_ not modelled 72.4 12 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 24 c2z5hB_ not modelled 72.0 15 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin PDBTitle: crystal structure of the head-to-tail junction of2 tropomyosin complexed with a fragment of tnt 25 c1ei3C_ not modelled 64.9 15 PDB header: PDB COMPND: 26 c2e43A_ not modelled 64.2 21 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 27 c1x8yA_ not modelled 63.1 24 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 28 c2v4hA_ not modelled 62.7 20 PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex 29 c1ca9D_ not modelled 62.6 19 PDB header:tnf signaling Chain: D: PDB Molecule:protein (tnf receptor associated factor 2); PDBTitle: structure of tnf receptor associated factor 2 in complex2 with a peptide from tnf-r2 30 c1n73C_ not modelled 61.5 14 PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 31 c2fxmB_ not modelled 58.3 15 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 32 c1gk4A_ not modelled 55.6 14 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 33 c3dtpA_ not modelled 53.4 29 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 34 c2zdiA_ not modelled 52.9 17 PDB header:chaperone Chain: A: PDB Molecule:prefoldin subunit beta; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3 35 c1fllA_ not modelled 50.7 8 PDB header:apoptosis Chain: A: PDB Molecule:tnf receptor associated factor 3; PDBTitle: molecular basis for cd40 signaling mediated by traf3 36 c1fosE_ not modelled 48.8 18 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 37 c2d3eD_ not modelled 47.6 23 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 38 c2xzrA_ not modelled 47.5 21 PDB header:cell adhesion Chain: A: PDB Molecule:immunoglobulin-binding protein eibd; PDBTitle: escherichia coli immunoglobulin-binding protein eibd 391-438 fused2 to gcn4 adaptors 39 c3mkxC_ not modelled 47.4 24 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 40 c3bvhE_ not modelled 47.3 24 PDB header:blood clotting Chain: E: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide 41 c3cvfA_ not modelled 47.1 17 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 42 c3ghgD_ not modelled 46.9 20 PDB header:blood clotting Chain: D: PDB Molecule:fibrinogen alpha chain; PDBTitle: crystal structure of human fibrinogen 43 c2a93B_ not modelled 45.2 22 PDB header:leucine zippers Chain: B: PDB Molecule:c-myc-max heterodimeric leucine zipper; PDBTitle: nmr solution structure of the c-myc-max heterodimeric2 leucine zipper, 40 structures 44 c2zdiC_ not modelled 42.0 15 PDB header:chaperone Chain: C: PDB Molecule:prefoldin subunit alpha; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3 45 c1lwuH_ not modelled 39.7 18 PDB header:blood clotting Chain: H: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of fragment d from lamprey fibrinogen complexed with2 the peptide gly-his-arg-pro-amide 46 c1junB_ not modelled 39.3 24 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 47 c3a5tB_ not modelled 38.7 24 PDB header:transcription regulator/dna Chain: B: PDB Molecule:transcription factor mafg; PDBTitle: crystal structure of mafg-dna complex 48 c2fxpA_ not modelled 38.4 25 PDB header:viral protein Chain: A: PDB Molecule:spike glycoprotein; PDBTitle: solution structure of the sars-coronavirus hr2 domain 49 c2efrB_ not modelled 37.5 17 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 50 c3u59C_ not modelled 37.5 11 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 51 c3hizB_ not modelled 36.4 12 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 52 c1cosB_ not modelled 36.4 48 PDB header:alpha-helical bundle Chain: B: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 53 c1cosC_ not modelled 36.4 48 PDB header:alpha-helical bundle Chain: C: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 54 c1cosA_ not modelled 36.4 48 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coiled serine; PDBTitle: crystal structure of a synthetic triple-stranded alpha-2 helical bundle 55 c3m9hB_ not modelled 35.9 29 PDB header:chaperone Chain: B: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain of the2 mycobacterium tuberculosis proteasomal atpase mpa 56 c1c1gA_ not modelled 35.6 16 PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form 57 c3ojaB_ not modelled 34.7 15 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 58 c1coiA_ not modelled 34.3 39 PDB header:alpha-helical bundle Chain: A: PDB Molecule:coil-vald; PDBTitle: designed trimeric coiled coil-vald 59 c3na7A_ not modelled 31.1 12 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 60 c3bvhC_ not modelled 30.8 16 PDB header:blood clotting Chain: C: PDB Molecule:fibrinogen gamma chain; PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide 61 d1fxkc_ not modelled 30.1 18 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 62 c2xgjA_ not modelled 29.1 17 PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance 63 c3u1aC_ not modelled 28.9 19 PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha 64 c1l4aD_ not modelled 28.8 6 PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:s-snap25 fusion protein; PDBTitle: x-ray structure of the neuronal complexin/snare complex2 from the squid loligo pealei 65 c2akfC_ not modelled 27.3 16 PDB header:protein binding Chain: C: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 66 c2akfA_ not modelled 27.3 16 PDB header:protein binding Chain: A: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 67 c3h32A_ not modelled 27.1 21 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha chain; PDBTitle: crystal structure of d-dimer from human fibrin complexed with gly-his-2 arg-pro-tyr-amide 68 c1pl5A_ not modelled 26.0 25 PDB header:dna binding protein/transcription Chain: A: PDB Molecule:regulatory protein sir4; PDBTitle: crystal structure analysis of the sir4p c-terminal coiled2 coil 69 c3ci9B_ not modelled 26.0 29 PDB header:transcription Chain: B: PDB Molecule:heat shock factor-binding protein 1; PDBTitle: crystal structure of the human hsbp1 70 c1ce9A_ not modelled 25.4 29 PDB header:helix capping Chain: A: PDB Molecule:protein (gcn4-pmse); PDBTitle: helix capping in the gcn4 leucine zipper 71 c1ce9B_ not modelled 25.4 29 PDB header:helix capping Chain: B: PDB Molecule:protein (gcn4-pmse); PDBTitle: helix capping in the gcn4 leucine zipper 72 c1ce9C_ not modelled 25.4 29 PDB header:helix capping Chain: C: PDB Molecule:protein (gcn4-pmse); PDBTitle: helix capping in the gcn4 leucine zipper 73 c1ce9D_ not modelled 25.4 29 PDB header:helix capping Chain: D: PDB Molecule:protein (gcn4-pmse); PDBTitle: helix capping in the gcn4 leucine zipper 74 c1nyhA_ not modelled 25.2 25 PDB header:transcription repressor Chain: A: PDB Molecule:regulatory protein sir4; PDBTitle: crystal structure of the coiled-coil dimerization motif of sir4 75 c3a2aC_ not modelled 25.0 29 PDB header:transport protein Chain: C: PDB Molecule:voltage-gated hydrogen channel 1; PDBTitle: the structure of the carboxyl-terminal domain of the human voltage-2 gated proton channel hv1 76 c1kwwC_ not modelled 25.0 22 PDB header:immune system, sugar binding protein Chain: C: PDB Molecule:mannose-binding protein a; PDBTitle: rat mannose protein a complexed with a-me-fuc. 77 c2akfB_ not modelled 24.9 17 PDB header:protein binding Chain: B: PDB Molecule:coronin-1a; PDBTitle: crystal structure of the coiled-coil domain of coronin 1 78 c2ba2A_ not modelled 24.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0134 protein mpn010; PDBTitle: crystal structure of the duf16 domain of mpn010 from2 mycoplasma pneumoniae 79 c1mofA_ not modelled 23.7 22 PDB header:viral protein Chain: A: PDB Molecule:moloney murine leukemia virus p15; PDBTitle: coat protein 80 c2pnvA_ not modelled 23.5 24 PDB header:membrane protein Chain: A: PDB Molecule:small conductance calcium-activated potassium PDBTitle: crystal structure of the leucine zipper domain of small-2 conductance ca2+-activated k+ (skca) channel from rattus3 norvegicus 81 c1bf5A_ not modelled 23.1 10 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 82 c1w5jB_ not modelled 23.0 21 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 83 c3ol1A_ not modelled 22.4 17 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 84 c2x7aB_ not modelled 22.2 14 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 85 c1l8dB_ not modelled 22.1 19 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 86 c1yvlB_ not modelled 22.1 10 PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 87 c2wq1A_ not modelled 21.8 23 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4 leucine zipper mutant with three ixxntxx motifs2 coordinating bromide 88 c2wq3A_ not modelled 21.8 23 PDB header:transcription Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: gcn4 leucine zipper mutant with three ixxntxx motifs2 coordinating chloride and nitrate 89 c2eqbC_ not modelled 21.7 13 PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex 90 c1w5jA_ not modelled 21.4 23 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 91 c1w5jD_ not modelled 21.4 23 PDB header:four helix bundle Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 92 c1w5jC_ not modelled 21.4 23 PDB header:four helix bundle Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 93 c1y4mC_ not modelled 21.3 16 PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2) 94 c1gcmA_ not modelled 20.9 19 PDB header:transcription regulation Chain: A: PDB Molecule:gcn4p-ii; PDBTitle: gcn4 leucine zipper core mutant p-li 95 c1w5kB_ not modelled 20.7 23 PDB header:four helix bundle Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 96 c1w5kA_ not modelled 20.7 23 PDB header:four helix bundle Chain: A: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 97 c1w5kC_ not modelled 20.7 23 PDB header:four helix bundle Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 98 c1w5kD_ not modelled 20.7 23 PDB header:four helix bundle Chain: D: PDB Molecule:general control protein gcn4; PDBTitle: an anti-parallel four helix bundle 99 c1by0A_ not modelled 20.3 28 PDB header:rna binding protein Chain: A: PDB Molecule:protein (hepatitis delta antigen); PDBTitle: n-terminal leucine-repeat region of hepatitis delta antigen