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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ykqC_

Fold library idPDB HeaderMoleculeTitle
c2ykqC_PDB header: rna-binding proteinChain: C: PDB Molecule: line-1 orf1p;PDBTitle: structure of the human line-1 orf1p trimer


Added to library: Sat Aug 13 09:50:01 2011
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence CDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDVENGTKLENTLQD
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Known secondary structure (DSSP)
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SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence IIQENFPNLARVQIQEIQRTPRHIIVRFTKVEXKEKXLRAAREKGRVTLKGKPIRLTVDLSAETLQARRE
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S


TT


 .........150.........160.........170.........180.........190.........200
Sequence WGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQXLRDFVTTRPALKELLKEALNX
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Known secondary structure (DSSP) SSTT


TTTTTSSTT
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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