Email l.a.kelley@imperial.ac.uk Description P0AB89 Date Thu Jan 5 11:14:54 GMT 2012 Unique Job ID 0cda2a1aeccc442b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2ptsA_ 100.0 95 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase 2 c3bhgA_ 100.0 55 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila 3 c2qgaC_ 100.0 46 PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound 4 c2vd6B_ 100.0 18 PDB header:lyase Chain: B: PDB Molecule:adenylosuccinate lyase; PDBTitle: human adenylosuccinate lyase in complex with its substrate2 n6-(1,2-dicarboxyethyl)-amp, and its products amp and3 fumarate. 5 c2pfmA_ 100.0 22 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis 6 d1c3ca_ 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 7 c1yisA_ 100.0 17 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase 8 d1re5a_ 100.0 21 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 9 d1i0aa_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 10 d1tj7a_ 100.0 17 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 11 d1q5na_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 12 d1hy0a_ 100.0 17 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 13 d1dofa_ 100.0 24 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 14 d1k62a_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 15 d1j3ua_ 100.0 15 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 16 c2e9fC_ 100.0 18 PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine 17 d1tjva_ 100.0 17 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 18 c3c8tA_ 100.0 20 PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 19 c1yfmA_ 100.0 16 PDB header:lyase Chain: A: PDB Molecule:fumarase; PDBTitle: recombinant yeast fumarase 20 d1yfma_ 100.0 16 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 21 d1fuoa_ not modelled 100.0 17 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 22 d1vdka_ not modelled 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 23 d1jswa_ not modelled 100.0 15 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 24 c3no9C_ not modelled 100.0 15 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis 25 c3ocfB_ not modelled 100.0 16 PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form 26 d1jswc_ not modelled 100.0 14 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 27 c3e04C_ not modelled 100.0 15 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase; PDBTitle: crystal structure of human fumarate hydratase 28 c2fenA_ not modelled 100.0 21 PDB header:isomerase Chain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme; PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2 29 c3gtdB_ not modelled 100.0 15 PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii 30 d1f1oa_ not modelled 100.0 24 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 31 c3r6yG_ not modelled 100.0 14 PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 32 c2ctoA_ not modelled 28.3 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 33 d1rp4a_ not modelled 18.4 11 Fold:ERO1-like Superfamily:ERO1-like Family:ERO1-like 34 c3ahrA_ not modelled 15.6 17 PDB header:oxidoreductase Chain: A: PDB Molecule:ero1-like protein alpha; PDBTitle: inactive human ero1 35 c2xgvA_ not modelled 15.0 23 PDB header:viral protein Chain: A: PDB Molecule:psiv capsid n-terminal domain; PDBTitle: structure of the n-terminal domain of capsid protein from2 rabbit endogenous lentivirus (relik) 36 c1wjvA_ not modelled 14.2 56 PDB header:dna binding protein Chain: A: PDB Molecule:cell growth regulating nucleolar protein lyar; PDBTitle: solution structure of the n-terminal zinc finger domain of2 mouse cell growth regulating nucleolar protein lyar 37 c2ev9B_ not modelled 13.1 43 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate 38 c3fbtB_ not modelled 12.7 33 PDB header:oxidoreductase, lyase Chain: B: PDB Molecule:chorismate mutase and shikimate 5-dehydrogenase PDBTitle: crystal structure of a chorismate mutase/shikimate 5-2 dehydrogenase fusion protein from clostridium3 acetobutylicum 39 c3bbnC_ not modelled 12.7 57 PDB header:ribosome Chain: C: PDB Molecule:ribosomal protein s3; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 40 d1nvta2 not modelled 12.2 29 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 41 d2cb2a1 not modelled 11.3 33 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:SOR-like 42 d1v5pa_ not modelled 10.7 50 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 43 d1vi2a2 not modelled 10.4 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 44 d1g3pa2 not modelled 9.6 33 Fold:N-terminal domains of the minor coat protein g3p Superfamily:N-terminal domains of the minor coat protein g3p Family:N-terminal domains of the minor coat protein g3p 45 d1npya2 not modelled 9.3 23 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 46 c3egqB_ not modelled 9.3 8 PDB header:transcription Chain: B: PDB Molecule:tetr family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (af_1817)2 from archaeoglobus fulgidus at 2.55 a resolution 47 d1p77a2 not modelled 9.1 20 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 48 c3dikA_ not modelled 8.9 22 PDB header:viral protein Chain: A: PDB Molecule:capsid protein p24; PDBTitle: pseudo-atomic model of the hiv-1 ca hexameric lattice 49 c1nvtA_ not modelled 8.8 27 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ 50 c3pwzA_ not modelled 8.7 27 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida 51 c1p74B_ not modelled 8.3 20 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae 52 c1dipA_ not modelled 7.9 14 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 53 d2qalc1 not modelled 7.7 38 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 54 c3u62A_ not modelled 7.6 57 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima 55 d1lbua1 not modelled 7.6 23 Fold:PGBD-like Superfamily:PGBD-like Family:Peptidoglycan binding domain, PGBD 56 c3pgjB_ not modelled 7.5 27 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate 57 c3tozA_ not modelled 7.4 27 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. 58 c2hk8B_ not modelled 7.4 20 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution 59 d1wjva1 not modelled 7.4 63 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:C2HC finger 60 d1nyta2 not modelled 7.4 29 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 61 c1ekuA_ not modelled 7.3 31 PDB header:immune system Chain: A: PDB Molecule:interferon gamma; PDBTitle: crystal structure of a biologically active single chain2 mutant of human ifn-gamma 62 c2eggA_ not modelled 7.3 57 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus 63 d1prtb1 not modelled 7.1 42 Fold:OB-fold Superfamily:Bacterial enterotoxins Family:Bacterial AB5 toxins, B-subunits 64 c2choA_ not modelled 6.5 83 PDB header:hydrolase Chain: A: PDB Molecule:glucosaminidase; PDBTitle: bacteroides thetaiotaomicron hexosaminidase with o-2 glcnacase activity 65 d1u5ta1 not modelled 6.5 3 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 66 c3o8qB_ not modelled 6.5 27 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae 67 c2zmeA_ not modelled 6.4 4 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 68 c3oakC_ not modelled 6.4 21 PDB header:transcription Chain: C: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex 69 c1npyA_ not modelled 6.4 43 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 70 c1jmtB_ not modelled 6.4 29 PDB header:rna binding protein Chain: B: PDB Molecule:splicing factor u2af 65 kda subunit; PDBTitle: x-ray structure of a core u2af65/u2af35 heterodimer 71 c2dinA_ not modelled 6.2 32 PDB header:dna binding protein Chain: A: PDB Molecule:cell division cycle 5-like protein; PDBTitle: solution structure of the myb_dna-binding domain of human2 cell division cycle 5-like protein 72 d2ibge1 not modelled 6.2 11 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Hedgehog (development protein), N-terminal signaling domain 73 d2uubc1 not modelled 6.1 50 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 74 c3no7A_ not modelled 6.0 23 PDB header:dna binding protein Chain: A: PDB Molecule:putative plasmid related protein; PDBTitle: crystal structure of the centromere-binding protein parb from plasmid2 pcxc100 75 c1nytC_ not modelled 6.0 27 PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ 76 c3cuqA_ not modelled 5.9 4 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 77 c2nloA_ not modelled 5.8 20 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum 78 d1jfla2 not modelled 5.7 12 Fold:ATC-like Superfamily:Aspartate/glutamate racemase Family:Aspartate/glutamate racemase 79 c2dchX_ not modelled 5.7 36 PDB header:hydrolase Chain: X: PDB Molecule:putative homing endonuclease; PDBTitle: crystal structure of archaeal intron-encoded homing endonuclease i-2 tsp061i 80 c1vi2B_ not modelled 5.6 15 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2; PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad 81 d1cg2a2 not modelled 5.6 22 Fold:Ferredoxin-like Superfamily:Bacterial exopeptidase dimerisation domain Family:Bacterial exopeptidase dimerisation domain 82 c2qv5A_ not modelled 5.6 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2773; PDBTitle: crystal structure of uncharacterized protein atu2773 from2 agrobacterium tumefaciens c58 83 c1iijA_ not modelled 5.5 50 PDB header:signaling protein Chain: A: PDB Molecule:erbb-2 receptor protein-tyrosine kinase; PDBTitle: solution structure of the neu/erbb-2 membrane spanning2 segment 84 c3hsbB_ not modelled 5.5 43 PDB header:rna binding protein/rna Chain: B: PDB Molecule:protein hfq; PDBTitle: crystal structure of ymah (hfq) from bacillus subtilis in complex with2 an rna aptamer 85 d2i9xa1 not modelled 5.2 43 Fold:SpoVG-like Superfamily:SpoVG-like Family:SpoVG-like 86 c2i9zB_ not modelled 5.2 43 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative septation protein spovg; PDBTitle: structural genomics, the crystal structure of full-length spovg from2 staphylococcus epidermidis atcc 12228 87 c1s1iC_ not modelled 5.2 15 PDB header:ribosome Chain: C: PDB Molecule:60s ribosomal protein l3; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. 88 c2jq1A_ not modelled 5.1 33 PDB header:antimicrobial protein Chain: A: PDB Molecule:phylloseptin-3; PDBTitle: phylloseptin-3