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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3o8qB_

Fold library idPDB HeaderMoleculeTitle
c3o8qB_PDB header: oxidoreductaseChain: B: PDB Molecule: shikimate 5-dehydrogenase i alpha;PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae


Added to library: Sat Aug 28 18:12:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYR
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Known secondary structure (DSSP)
SS
TT

T



TT
TT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD
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Known secondary structure (DSSP)
S
T

S
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ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence QQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSGELPAIDPVIFSSRSVCYDMM
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Known secondary structure (DSSP) T

SSSTGGGS
GGG

S

S









GGG

TT
S
 .........220.........230.........240.........250.........260........
Sequence YGKGYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILRELRKNLEG
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Known secondary structure (DSSP)

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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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