PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2eggA_

Fold library id	PDB Header	Molecule	Title
c2eggA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: shikimate 5-dehydrogenase;	PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus

Links to external resources
Added to library: Tue Mar 16 12:05:19 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G H M E K V Y G L I G F P V E H S L S P L M H N D A F A R L G I P A R Y H L F S V E P G Q V G A A I A G V R A L G I A G V N V T I P H K L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S T T
T T
T
T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V I P F L D E V D E H A R R I G A V N T I I N N D G R L V G Y N T D G L G Y V Q A L E E E M N I T L D G K R I L V I G A G G G A R G I Y F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G
S
T
T T
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L S T A A E R I D M A N R T V E K A E R L V R E G D E R R S A Y F S L A E A E T R L A E Y D I I I N T T S V G M H P R V E V Q P L S L E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S S S
S S S
T G G G
S
S
T T
S S
S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . .

Sequence L R P G V I V S D I I Y N P L E T K W L K E A K A R G A R V Q N G V G M L V Y Q G A L A F E K W T G Q W P D V N R M K Q L V I E A L R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	H	M	E	K	V	Y	G	L	I	G	F	P	V	E	H	S	L	S	P	L	M	H	N	D	A	F	A	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		T	T		S												T	T												T	T													T								T	T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	I	P	F	L	D	E	V	D	E	H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	T	L	D	G	K	R	I	L	V	I	G	A	G	G	G	A	R	G	I	Y	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G		S										T									T	T																				T	T				T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	S	T	A	A	E	R	I	D	M	A	N	R	T	V	E	K	A	E	R	L	V	R	E	G	D	E	R	R	S	A	Y	F	S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T	S	V	G	M	H	P	R	V	E	V	Q	P	L	S	L	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S							S	S											S		S	S	S												T	G	G	G		S						S		T	T		S	S			S			S	S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Sequence	L	R	P	G	V	I	V	S	D	I	I	Y	N	P	L	E	T	K	W	L	K	E	A	K	A	R	G	A	R	V	Q	N	G	V	G	M	L	V	Y	Q	G	A	L	A	F	E	K	W	T	G	Q	W	P	D	V	N	R	M	K	Q	L	V	I	E	A	L	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									S	S	S	S										T	T						S																	S