PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1p74B_

Fold library id	PDB Header	Molecule	Title
c1p74B_	PDB header: oxidoreductase	Chain: B: PDB Molecule: shikimate 5-dehydrogenase;	PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae

Links to external resources
Added to library: Tue Mar 16 14:00:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D L Y A V W G N P I A Q S K S P L I Q N K L A A Q T H Q T M E Y I A K L G D L D A F E Q Q L L A F F E E G A K G C N I T S P F K E R A Y Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
T T T T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L A D E Y S Q R A K L A E A C N T L K K L D D G K L Y A D N T D G I G L V T D L Q R L N W L R P N Q H V L I L G A G G A T K G V L L P L L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
S
S S S
T T
T T
S S T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A Q Q N I V L A N R T F S K T K E L A E R F Q P Y G N I Q A V S M D S I P L Q T Y D L V I N A T S A A S V D A E I L K L G S A F Y D M Q Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S G G G S
G G G
S
B S
T T B S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . .

Sequence K G T D T P F I A L C K S L G L T N V S D G F G M L V A Q A A H S F H L W R G V M P D F V S V Y E Q L K K A M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	L	Y	A	V	W	G	N	P	I	A	Q	S	K	S	P	L	I	Q	N	K	L	A	A	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	K	G	C	N	I	T	S	P	F	K	E	R	A	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		T	T														T	T												T	T	T											T	T								T	T							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	D	E	Y	S	Q	R	A	K	L	A	E	A	C	N	T	L	K	K	L	D	D	G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S										T			S						S	S	S																			T	T				T	T								S	S	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	Q	Q	N	I	V	L	A	N	R	T	F	S	K	T	K	E	L	A	E	R	F	Q	P	Y	G	N	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A	T	S	A	A	S	V	D	A	E	I	L	K	L	G	S	A	F	Y	D	M	Q	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	S												G	G	G	S							G	G	G				S		B	S																	T	T	B	S					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Sequence	K	G	T	D	T	P	F	I	A	L	C	K	S	L	G	L	T	N	V	S	D	G	F	G	M	L	V	A	Q	A	A	H	S	F	H	L	W	R	G	V	M	P	D	F	V	S	V	Y	E	Q	L	K	K	A	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S											T	T							S																	S