PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3pgjB_

Fold library id	PDB Header	Molecule	Title
c3pgjB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: shikimate dehydrogenase;	PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate

Links to external resources
Added to library: Sat Dec 11 13:48:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I D Q Y A V F G N H S K S P F I H T L F A R Q T Q Q S M I Y T A Q C V P V D G F T E A A K H F F A Q G G R G C N V T V P F K E E A Y R F A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L T E R A R L A G A V N T L K K L D D G E I L G D N T D G E G L V Q D L L A Q Q V L L K G A T I L L I G A G G A A R G V L K P L L D Q Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
T T S
T T
T T
S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S I T V T N R T F A K A E Q L A E L V A A Y G E V K A Q A F E Q L K Q S Y D V I I N S T S A S L D G E L P A I D P V I F S S R S V C Y D M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T T S
G G G
S
S
S S T T T T T
G G G
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . .

Sequence M Y G K G Y T V F N Q W A R Q H G C A Q A I D G L G M L V G Q A A E S F M L W R G L R P G T K Q I L R E L R K N L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
T S

Download: PDB structure FASTA sequence
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	D	Q	Y	A	V	F	G	N	H	S	K	S	P	F	I	H	T	L	F	A	R	Q	T	Q	Q	S	M	I	Y	T	A	Q	C	V	P	V	D	G	F	T	E	A	A	K	H	F	F	A	Q	G	G	R	G	C	N	V	T	V	P	F	K	E	E	A	Y	R	F	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T												T	T												T	T								T	T	S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	T	E	R	A	R	L	A	G	A	V	N	T	L	K	K	L	D	D	G	E	I	L	G	D	N	T	D	G	E	G	L	V	Q	D	L	L	A	Q	Q	V	L	L	K	G	A	T	I	L	L	I	G	A	G	G	A	A	R	G	V	L	K	P	L	L	D	Q	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S						T	T	S																			T	T				T	T									S					T	T							T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	I	T	V	T	N	R	T	F	A	K	A	E	Q	L	A	E	L	V	A	A	Y	G	E	V	K	A	Q	A	F	E	Q	L	K	Q	S	Y	D	V	I	I	N	S	T	S	A	S	L	D	G	E	L	P	A	I	D	P	V	I	F	S	S	R	S	V	C	Y	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S													T	T	S							G	G	G			S			S						S	S	T	T	T	T	T							G	G	G			T	T						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence	M	Y	G	K	G	Y	T	V	F	N	Q	W	A	R	Q	H	G	C	A	Q	A	I	D	G	L	G	M	L	V	G	Q	A	A	E	S	F	M	L	W	R	G	L	R	P	G	T	K	Q	I	L	R	E	L	R	K	N	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S											T	T		S					T																	S