PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3bbnC_

Fold library id	PDB Header	Molecule	Title
c3bbnC_	PDB header: ribosome	Chain: C: PDB Molecule: ribosomal protein s3;	PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.

Links to external resources
Added to library: Tue Mar 16 13:34:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M G Q K I N P L G F R L G T T Q S H Y S L W F S Q P K N Y A E G L Q E D Q K I R D C I K N Y V Q K N T K T S S G V E G I A R I E I Q K R I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S T T T T S
S B
T T S S S
S S S S
T T T T T
B
B S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L I Q V I I H M G F P K L L I E N R P Q G V E D L K I N V Q K E L N C V N R K L N I A I T R I A K P Y G D P N I L A E F I A G Q L K S R V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
T T T T S
S S S
T T S
S S
S
T T T S S T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F R K A M K K A I E L T E Q A D T K G I Q I Q I A G R I D G K E I A R I E W I R E G R V P L Q T I R A K I D Y C A Y T V R T I Y G V L G I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S
T T
S S
S S
S T T
B
S S

. . . . . . .

Sequence I W I F M G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	Q	K	I	N	P	L	G	F	R	L	G	T	T	Q	S	H	Y	S	L	W	F	S	Q	P	K	N	Y	A	E	G	L	Q	E	D	Q	K	I	R	D	C	I	K	N	Y	V	Q	K	N	T	K	T	S	S	G	V	E	G	I	A	R	I	E	I	Q	K	R	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S	S	T	T	T	T	S			S	B						T	T	S	S																S			S	S	S	S			T	T	T	T	T							B		B	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	I	Q	V	I	I	H	M	G	F	P	K	L	L	I	E	N	R	P	Q	G	V	E	D	L	K	I	N	V	Q	K	E	L	N	C	V	N	R	K	L	N	I	A	I	T	R	I	A	K	P	Y	G	D	P	N	I	L	A	E	F	I	A	G	Q	L	K	S	R	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B							S		T	T	T	T	S		S	S	S		T	T											S		S	S												S		T	T	T	S								S	T	T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	R	K	A	M	K	K	A	I	E	L	T	E	Q	A	D	T	K	G	I	Q	I	Q	I	A	G	R	I	D	G	K	E	I	A	R	I	E	W	I	R	E	G	R	V	P	L	Q	T	I	R	A	K	I	D	Y	C	A	Y	T	V	R	T	I	Y	G	V	L	G	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T								T	T			S								S			T	T		S	S													S	S		S	T	T			B									S	S
	.	.	.	.	.	.	.
Sequence	I	W	I	F	M	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)