Fold library entry viewer: d1vdka_

Added to library: Tue Mar 16 12:51:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	I	E	R	D	T	M	G	E	V	R	V	P	A	D	K	Y	W	G	A	Q	T	Q	R	S	L	E	N	F	R	I	G	T	D	R	F	R	M	P	L	E	I	I	R	A	Y	G	M	L	K	K	A	A	A	R	A	N	L	E	L	G	E	L	P	E	E	I	A	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T							T	T																S	S	T	T	T		B																							T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	Q	A	A	E	E	V	V	Q	G	K	W	D	D	H	F	P	L	V	V	F	Q	T	G	S	G	T	Q	T	N	M	N	V	N	E	V	I	A	N	R	A	S	E	I	L	G	K	P	L	G	S	K	Y	A	H	P	N	D	H	V	N	R	G	Q	S	S	N	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T	G	G	G				B	S	S	S		T	T																				T	T			T	T	S		S	S							T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	P	T	A	M	Y	V	A	V	A	L	A	L	H	Q	R	L	Y	P	A	V	E	G	L	I	R	T	F	T	A	K	A	Q	A	F	D	Q	I	V	K	V	G	R	T	H	L	M	D	A	V	P	I	T	L	G	Q	E	I	G	S	W	A	A	Q	L	K	T	T	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T																			T	T	T								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	V	K	E	M	E	K	G	L	Y	N	L	A	I	G	G	T	A	V	G	T	G	L	N	A	H	P	R	F	G	E	L	V	A	K	Y	L	A	E	E	T	G	L	P	F	R	V	A	E	N	R	F	A	A	L	A	A	H	D	E	L	V	N	V	M	G	A	I	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	G				T	T		T	T	T	S	S		T	T	S		T	T														S	S						S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	A	G	A	L	M	K	I	G	N	D	V	R	W	L	A	S	G	P	Y	A	G	I	G	E	I	T	I	P	A	N	E	P	G	S	S	I	M	P	G	K	V	N	P	T	Q	V	E	A	L	T	M	V	V	V	R	V	Y	G	N	D	H	T	V	A	F	A	G	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T			S	S	S	S			S							S			S	S			T	T																													T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	N	F	Q	L	N	V	Y	K	P	V	M	A	Y	S	T	L	E	S	I	N	L	L	A	D	A	V	A	S	F	D	A	H	L	A	Q	G	I	E	P	N	L	E	R	I	E	E	Y	L	Q	K	N	P	M	L	A	T	A	L	N	K	A	I	G	Y	D	K	A	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	B		S																											T	G	G	G													T	T		G	G	G	G									S					T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Sequence	I	V	K	K	A	L	K	K	T	L	K	Q	A	A	L	E	L	G	Y	L	T	E	E	E	F	D	R	I	V	V	P	M	R	L	A	K	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	S												T	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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