Fold library entry viewer: c2choA_

Added to library: Tue Mar 16 13:23:23 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Q	P	P	P	Q	Q	L	I	V	Q	N	K	T	I	D	L	P	A	V	Y	Q	L	N	G	G	E	E	A	N	P	H	A	V	K	V	L	K	E	L	L	G	M	L	I	S	I	G	E	K	G	D	K	S	V	R	K	Y	S	R	Q	I	P	D	H	K	E	G	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S													S	S					S	T	T	T	S																					T	T	S	G	G	G	G	G	G	T	T	T	S		S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	V	N	E	K	E	I	V	L	A	G	N	D	E	R	G	T	Y	Y	A	L	Q	T	F	A	Q	L	L	K	D	G	K	L	P	E	V	E	I	K	D	Y	P	S	V	R	Y	R	G	V	V	E	G	F	Y	G	T	P	W	S	H	Q	A	R	L	S	Q	L	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S							S	S																B	T	T												S	S	S									S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	K	N	K	M	N	T	Y	I	Y	G	P	K	D	D	P	Y	H	S	A	P	N	W	R	L	P	Y	P	D	K	E	A	A	Q	L	Q	E	L	V	A	V	A	N	E	N	E	V	D	F	V	W	A	I	H	P	G	Q	D	I	K	W	N	K	E	D	R	D	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T									T	T		T	T	T	S	T	T	G	G	G	S																				T	T										T	T	T			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	K	F	E	K	M	Y	Q	L	G	V	R	S	F	A	V	F	F	D	D	I	S	G	E	G	T	N	P	Q	K	Q	A	E	L	L	N	Y	I	D	E	K	F	A	Q	V	K	P	D	I	N	Q	L	V	M	C	P	T	E	Y	N	K	S	W	S	N	P	N	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T										S			S	G	G	G																T	T	T	T	S	S	S									S	S		S	G	G	G	S		T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	L	T	T	L	G	D	K	L	N	P	S	I	Q	I	M	W	T	G	D	R	V	I	S	D	I	T	R	D	G	I	S	W	I	N	E	R	I	K	R	P	A	Y	I	W	W	N	F	P	V	S	D	Y	V	R	D	H	L	L	L	G	P	V	Y	G	N	D	T	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		T	T	S							S	S	S	S																T	S									S			T	T	S	T	T					S					S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	K	E	M	S	G	F	V	T	N	P	M	E	H	A	E	S	S	K	I	A	I	Y	S	V	A	S	Y	A	W	N	P	A	K	Y	D	T	W	Q	T	W	K	D	A	I	R	T	I	L	P	S	A	A	E	E	L	E	C	F	A	M	H	N	S	D	L	G	P	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G										S		T	T	T	T														G	G	G																G	G	G										T	S					S		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	G	Y	R	R	E	E	S	M	D	I	Q	P	A	A	E	R	F	L	K	A	F	K	E	G	K	N	Y	D	K	A	D	F	E	T	L	Q	Y	T	F	E	R	M	K	E	S	A	D	I	L	L	M	N	T	E	N	K	P	L	I	V	E	I	T	P	W	V	H	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S	G	G	G														T																														S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	L	T	A	E	M	G	E	E	V	L	K	M	V	E	G	R	N	E	S	Y	F	L	R	K	Y	N	H	V	K	A	L	Q	Q	Q	M	F	Y	I	D	Q	T	S	N	Q	N	P	Y	Q	P	G	V	K	T	A	T	R	V	I	K	P	L	I	D	R	T	F	A	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																											S				S	S	S		S				S	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	K	F	F	N	Q	K	F	N	A	H	L	D	A	T	T	D	Y	M	P	H	K	M	N	L	P	L	Q	V	K	A	N	R	V	L	I	S	P	V	E	I	E	L	D	A	I	Y	P	G	E	N	I	Q	I	N	F	R	L	S	A	G	L	Q	K	A	P	V	K	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T								S			S	S	B									T	T																															T	T
	.	.	.	.	.	.	.	.	.	640	.
Sequence	R	F	Q	F	V	L	T	I	E	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S

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PDB structure

FASTA sequence

Hidden Markov model

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