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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Feb 22

Fold library idPDB HeaderMoleculeTitle
c6t1dE_ 2.20 sugar binding protein Chain: E: lectin;
c6olnC_ 2.50 de novo protein Chain: C: designed trimeric coiled coil peptide;
c6jumA_ 1.78 replication/dna Chain: A: dna polymerase iv;
c6tm5W_ 3.90 cell cycle Chain: W: anaphase-promoting complex subunit cdc26;
c6pkiD_ 2.29 hydrolase Chain: D: n-acetylglucosamine-1-phosphodiester alpha-n-
c6qlzB_ 2.34 ligase Chain: B: e3 ubiquitin-protein ligase mylip;
c6o18C_ 2.55 hydrolase Chain: C: alfc;
c6v4xI_ 3.20 rna binding protein/rna Chain: I: cleavage and polyadenylation specificity factor subunit 2;
c6ulwC_ 3.40 biosynthetic protein Chain: C: amino acid adenylation domain-containing protein;
c6l5pA_ 2.60 transferase Chain: A: ggcgt;
c6ohmA_ 1.90 hydrolase Chain: A: phospholipase d2;
c6tx1B_ 2.09 protein binding Chain: B: predicted protein;
c6khxG_ 2.58 oxidoreductase Chain: G: peroxiredoxin;
c6ohrA_ 3.20 hydrolase/hydrolase inhibitor Chain: A: phospholipase d1, chimeric constuct;
c6pkyA_ 3.00 hydrolase Chain: A: n-acetylglucosamine-1-phosphodiester alpha-n-
c6v86F_ 4.63 viral protein Chain: F: phosphoprotein;
c6vagA_ 1.40 viral protein Chain: A: phosphoprotein;
c6u39F_ 2.40 calcium-binding protein/membrane protein Chain: F: voltage-dependent l-type calcium channel subunit alpha-1c;
c6mf4A_ 1.80 cell cycle, transferase Chain: A: cell cycle serine/threonine-protein kinase cdc5/msd2;
c6efdA_ 1.85 sugar binding protein Chain: A: streptococcal hemagglutinin;
c6swsD_ 3.00 transcription Chain: D: phosphoinositide 3-kinase adapter protein 1;
c6jd6A_ 2.20 transport protein Chain: A: ankyrin repeat domain-containing protein emb506,
c6jh8B_ 2.15 structural protein/protein binding Chain: B: cordon-bleu mim chimeric peptide;
c6os0A_ 2.90 membrane protein Chain: A: type-1 angiotensin ii receptor,soluble cytochrome b562 bril
c6olnA_ 2.50 de novo protein Chain: A: designed trimeric coiled coil peptide;
c6kv2D_ 2.00 oxidoreductase Chain: D: trypsin inhibitor 1;
c6u3dC_ 1.75 calcium-binding protein/membrane protein Chain: C: voltage-dependent l-type calcium channel subunit alpha-1c;
c6tljW_ 3.80 cell cycle Chain: W: anaphase-promoting complex subunit cdc26;
c6swd0_ 3.20 ribosome Chain: 0: 30s ribosomal protein al41;
c6l4pB_ 1.70 contractile protein/motor protein Chain: B: flagellar outer dynein arm heavy chain gamma;
c6sw9Y_ 4.20 ribosome Chain: Y: 30s ribosomal protein s27ae;
c6lgxA_ 3.10 viral protein Chain: A: glycoprotein,glycoprotein,glycoprotein;
c6jhoD_ 2.10 coupling protein Chain: D: cag pathogenicity island protein (cag5);
c6u3aC_ 1.65 calcium-binding protein/membrane protein Chain: C: voltage-dependent l-type calcium channel subunit alpha-1c;
c6u39L_ 2.40 calcium-binding protein/membrane protein Chain: L: voltage-dependent l-type calcium channel subunit alpha-1c;
c6tngB_ 4.10 dna binding protein Chain: B: fanconi anemia complementation group i;
c6jsjB_ 3.20 hydrolase Chain: B: dynamin-like gtpase mgm1, mitochondrial;
c6v85A_ 4.38 viral protein Chain: A: rna-directed rna polymerase l;
c6qkvA_ 2.01 transferase Chain: A: trna (cytidine(34)-2'-o)-methyltransferase;
c6tm6A_ 1.63 antimicrobial protein Chain: A: mucin-2;
c6u11A_ 2.70 hydrolase Chain: A: egf-like domain-containing protein;
c6rfuB_ 2.80 immunosuppressant Chain: B: inosine-5'-monophosphate dehydrogenase;
c6vjvB_ 1.59 electron transport Chain: B: ferredoxin;
c6u39P_ 2.40 calcium-binding protein/membrane protein Chain: P: voltage-dependent l-type calcium channel subunit alpha-1c;
c6olnF_ 2.50 de novo protein Chain: F: designed trimeric coiled coil peptide;
c6v4xD_ 3.20 rna binding protein/rna Chain: D: u7 snrna-associated sm-like protein lsm11;
c6vopA_ 2.65 lyase Chain: A: aldolase;
c6jl3A_ 1.30 signaling protein Chain: A: ubiquitin domain-containing protein dsk2,putative;
c6u39J_ 2.40 calcium-binding protein/membrane protein Chain: J: voltage-dependent l-type calcium channel subunit alpha-1c;
c6tljG_ 3.80 cell cycle Chain: G: anaphase-promoting complex subunit cdc26;
c6jhcA_ 1.60 lyase Chain: A: hydroxynitrile lyase;
c6sceA_ 1.83 dna Chain: A: uncharacterized protein;
c6tg5A_ UNK biosynthetic protein Chain: A: macpd;
c6tutR_ 3.25 transcription Chain: R: repressor of rna polymerase iii transcription maf1,
c6tnfB_ 3.80 dna binding protein Chain: B: fanconi anemia complementation group i;
c6v4xH_ 3.20 rna binding protein/rna Chain: H: cleavage and polyadenylation specificity factor subunit 3;
c6s4cA_ 2.00 structural protein Chain: A: collagen alpha-1(vii) chain;
c6u39N_ 2.40 calcium-binding protein/membrane protein Chain: N: voltage-dependent l-type calcium channel subunit alpha-1c;
c6u39B_ 2.40 calcium-binding protein/membrane protein Chain: B: voltage-dependent l-type calcium channel subunit alpha-1c;
c6h7eB_ 2.30 structural protein Chain: B: cdna flj56134, highly similar to rap guanine nucleotide
c6tx3A_ 2.96 transferase Chain: A: histone parylation factor 1;
c6qlyA_ 2.50 ligase Chain: A: e3 ubiquitin-protein ligase mylip;
c6kr6A_ 2.90 rna binding protein/rna Chain: A: protein piwi;
c6swc0_ 3.30 ribosome Chain: 0: 30s ribosomal protein al41;
c6olnB_ 2.50 de novo protein Chain: B: designed trimeric coiled coil peptide;
c6tjvD_ 3.20 membrane protein Chain: D: nadh dehydrogenase subunit 4;
c6sw90_ 4.20 ribosome Chain: 0: 50s ribosomal protein l41e;
c6tniA_ 3.40 dna binding protein Chain: A: uncharacterized protein;
c6tjvF_ 3.20 membrane protein Chain: F: nadh dehydrogenase subunit 5;
c6u39R_ 2.40 calcium-binding protein/membrane protein Chain: R: voltage-dependent l-type calcium channel subunit alpha-1c;
c6u39D_ 2.40 calcium-binding protein/membrane protein Chain: D: voltage-dependent l-type calcium channel subunit alpha-1c;
c6jd6B_ 2.20 transport protein Chain: B: ankyrin repeat domain-containing protein, chloroplastic;
c6tjvP_ 3.20 membrane protein Chain: P: tlr0906 protein;
c6u3aD_ 1.65 calcium-binding protein/membrane protein Chain: D: voltage-dependent l-type calcium channel subunit alpha-1c;
c6u39T_ 2.40 calcium-binding protein/membrane protein Chain: T: voltage-dependent l-type calcium channel subunit alpha-1c;
c6vacA_ 5.70 protein transport Chain: A: vacuolar protein sorting-associated protein 35;
c6u39H_ 2.40 calcium-binding protein/membrane protein Chain: H: voltage-dependent l-type calcium channel subunit alpha-1c;
c6tngA_ 4.10 dna binding protein Chain: A: uncharacterized protein;
c6tmrA_ 2.89 viral protein Chain: A: glycoprotein;
c6tm5G_ 3.90 cell cycle Chain: G: anaphase-promoting complex subunit cdc26;
c6olnE_ 2.50 de novo protein Chain: E: designed trimeric coiled coil peptide;
c6v4xC_ 3.20 rna binding protein/rna Chain: C: u7 snrna-associated sm-like protein lsm10;
c6efbA_ 1.90 sugar binding protein Chain: A: sk150 siglec + unique;
c6u3dD_ 1.75 calcium-binding protein/membrane protein Chain: D: voltage-dependent l-type calcium channel subunit alpha-1c;
c6mf5B_ 2.70 cell cycle, transferase Chain: B: cell cycle serine/threonine-protein kinase cdc5/msd2;
c6k81B_ 2.28 hydrolase Chain: B: small vasohibin-binding protein;
c6ohrF_ 3.20 hydrolase/hydrolase inhibitor Chain: F: phospholipase d1, chimeric constuct;
c6tnfA_ 3.80 dna binding protein Chain: A: fancd2;
c6olnD_ 2.50 de novo protein Chain: D: designed trimeric coiled coil peptide;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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