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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6kr6A_

Fold library idPDB HeaderMoleculeTitle
c6kr6A_2.90PDB header: rna binding protein/rnaChain: A: PDB Molecule: protein piwi;


Added to library: Sat Feb 22 08:39:22 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DGVPVMLQTNFFRLKTKPEWRIVHYHVEFEPSIENPRVRMGVLSNHANLLGSGYLFDGLQLFTTRKFEQE
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Known secondary structure (DSSP)


SS


SS

S
T
TTTTSS


SSS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ITVLSGKSKLDIEYKISIKFVGFISCAEPRFLQVLNLILRRSMKGLNLELVGRNLFDPRAKIEIREFKME
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Known secondary structure (DSSP)
TTT



TTSGGGT
TT
GGG
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LWPGYETSIRQHEKDILLGTEITHKVMRTETIYDIMRRCSDEVRVNVLDLIVLTDYNNRTYRINDVDFGQ
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Known secondary structure (DSSP)
SS


B

TT
TTSS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TPKSTFSCKGRDISFVEYYLTKYNIRIRDHNQPLLISVVLIPELCRVNFQLMRAMSSYTRMNPKQRTDRL
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Known secondary structure (DSSP)
TT

SS
S





SS




GGG




 .........290.........300.........310.........320.........330.........340.........350
Sequence RAFNHRLQNTPESVKVLRDWNMELDKNVTEVQGRIIGQQNIVFHNGKVPAGENADWQRHFRDQRMLTTPS
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Known secondary structure (DSSP)
TT




SS

TTTTB
TTTSTT


S


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DGLDRWAVIAPQRNSHELRTLLDSLYRAASGMGLRIRSPQEFIIYDDRTGTYVRAMDDCVRSDPKLILCL
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Known secondary structure (DSSP) S
B
S
GGGT

B


SS

TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VPNDNAERYSSIKKRGYVDRAVPTQVVTLKTTKNRSLMSIATKIAIQLNCKLGYTPWMIELPLSGLMTIG
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Known secondary structure (DSSP) SS

TTS


T
TTTT

S




SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FDIAKSTRDRKRAYGALIASMDLQQNSTYFSTVTECANTLWPMIAKALRQYQHEHRKLPSRIVFYRDGVG
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Known secondary structure (DSSP)
SS
TT











SSS

S


 .........570.........580.........590.........600.........610.........620.........630
Sequence SLKQLFEFEVKDIIEKLKTEYARVQLSPPQLAYIVVTRSMNTRFFLNGQNPPPGTIVDDVITLPERYDFY
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Known secondary structure (DSSP) TTT




SS

BTTB


TT
SSSS
SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LVSQQVRQGTVSPTSYNVLYSSMGLSPEKMQKLTYKMCHLYYNWSGTTRVPAVCQYAKKLATLVGTNLHS
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Known secondary structure (DSSP)
S

SSS




S


TT

TTSSB

SS
TT
S
 .........710...
Sequence IPQNALEKKFYYL
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Known secondary structure (DSSP)


GGGTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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