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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tngA_

Fold library idPDB HeaderMoleculeTitle
c6tngA_4.10PDB header: dna binding proteinChain: A: PDB Molecule: uncharacterized protein;


Added to library: Sat Feb 22 08:30:14 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVFEELLRTSGIILKVGEGQNEIAVDQTAFQKKLRVALEKHPSYPGVVNEFISGLESHIKDRSQFKNCLL
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Known secondary structure (DSSP)
S




SSS




S
TTTSSSTTTSTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PCCESLIKLLLGIKILQPAVVTLLLEKIPEFFFDVVGTFGTNFPRLIVNQFKWLDGLLDSQDLVKKLMQM
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Known secondary structure (DSSP)




T

TTTTTTTTT
S


TTS

TTTT



S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSVSPVPIQHDIITSLPEILEDSQQNEVARELSCLLKQGRRLTVPILDALSRLDLDAELLAKVRQSAMTI
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Known secondary structure (DSSP) TSS

TTSS
SS
TSS
SS
SSTTTTS


SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPSVKLEDLPVVIKFILHNVKAADAVEVISDLRKSLDLSSTSQNCVKLLFDVIKLAVRFQKDVSEAWIKA
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Known secondary structure (DSSP) GGG

SS
S

SGGG





TTTTSSST
 .........290.........300.........310.........320.........330.........340.........350
Sequence IENSTSVSDHKVLDLIVLLLIHSTNSKNRKQTEKVLRSKIRLGCMPEQLMQNAFQNHSMVIKDFFPSILS
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Known secondary structure (DSSP) TTS

SSS


SSSTT
TS
S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAQTFLHSAHPAVVSFGSCMYKQAFAVFDSYCQQEVVCALVTHVCSGNETELDISLDVLTDLVILHPSLL
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Known secondary structure (DSSP) TTSSSSSSS

S

TT
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRYATFVKTILDSMQKLNPCQIRKLFYILSTLAFSQRQEGSYIQDDMHMVIRKWLSSSVPNHKQMGIIGA
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Known secondary structure (DSSP) TTTTTTTT




TT
S

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence VTMMGSVALIECDGQLSTLLDLVGFCCEQTPEVLALYYDELANLIEKQKGNLDLQLLDKFGKSLVEDFPN
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Known secondary structure (DSSP) T

TTT
T
SSSS
TTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence DFVVDLSPTVDGSFLFPVKSLYNLDEDETQGAIAINLLPLVSQKRVVSPICLSPCFRLLRLYTGEQNNGS
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Known secondary structure (DSSP) SS



TT


S
SS


STT



S
S

S



T



S

SSTTTTTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LEEIDALLGCPLYLTDLEVEGKLDSLSKQEREFLCSLLFYALNWFREVVNAFCQQQDAEMKGKVLTRLQN
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Known secondary structure (DSSP)
STTGGGTT









SGGGTT

SSTTSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence ITELQNVLGKCLAATPGYVPPPATFDSEAPAQLQSYRPYFRELDLEVFSVLHCGLLTLGPAELCFLLDDM
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Known secondary structure (DSSP) TSSS




S


S




SSTTSSSS



SSTT

TT






SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence CWKLEHVLTFSHLCQRSPKEVAVCVVKLLKPLCNHMENMHNYFQTVIPNQGVVDESGLNIQEYQLMSSCY
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Known secondary structure (DSSP) TTTT


TTTTS
SGGGTTSTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence HQLLLAFRLLFAWSGFSQHENSNLLRSALQVLADRLKPGETEFLPLEELISESFQYLLNFQASIPSFQCA
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Known secondary structure (DSSP) S
GGGSSTT

SS


SS


STTT



 .........920.........930.........940.........950.........960.........970.........980
Sequence FILTQVLMAISEKPMTGWKREKMASLAKQFLCQSWMKPGGDREKGSHFNSALHTLLCVYLEHTDNILKAI
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Known secondary structure (DSSP) TTS

STTTS






SSSTTTTTTS


TT
 .........990.........1000.........1010.........1020.......
Sequence EEISSVGVPELINSAKDGCSSTYPTLSRQTFPVFFRVMMAQLESSVK
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Known secondary structure (DSSP) TSSS
SBTTTT
BSS

TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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