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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6t1dE_

Fold library idPDB HeaderMoleculeTitle
c6t1dE_2.20PDB header: sugar binding proteinChain: E: PDB Molecule: lectin;


Added to library: Sat Feb 22 08:29:22 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CKITATPRQFQPALLSTSKWIWTGENPIPGGSNIISTRPFRKNITAPCGKCSVCATIVVASDDAHTFYVN
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Known secondary structure (DSSP)











STT



SS
STT

B
S

TT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVRIGTGAGFRQGQALFVALQPTWNLFAIAGQNLVANSPAGIMASILVHFSDGTSETFVTDESWKTLRAA
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Known secondary structure (DSSP) T

SS
STTB

TTS

STTS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PPENFQLPSTNDSNWPSAAVQGAYQNSVWGPPVLPPVLPLRGSNWIWTSDNVNGAAPVGSRAFRKTVNQC
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Known secondary structure (DSSP)

TTTTSTTS

TTS
B

SS
SSS


B

BSS

TT

TT
BTTB

S
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence TKVAVCATVLIAADDRYTLYVNGATVGSGSSYTVADAYTIPNLHPTFNTFAINATNGGGPAGVIATILIT
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Known secondary structure (DSSP) TS
STT

SSB




SS
SS

 .........290.........300.........310.........320.........330........
Sequence YSDGSNETVVTDASWKAIQTIPQGFQPPLIDEFGWESAKIIGAFGVAPWGAGMVIPSA
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Known secondary structure (DSSP) TTS

STTSSS

TT
SSSS


TT

TT
TTTTT

B

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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