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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tjvF_

Fold library idPDB HeaderMoleculeTitle
c6tjvF_3.20PDB header: membrane proteinChain: F: PDB Molecule: nadh dehydrogenase subunit 5;


Added to library: Sat Feb 22 08:58:31 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FADTVWLIPFYSLAGMVLSLIWSPGITRKTGPRPAGYLNILLTFFSFVHALLATVAIANQPPQYLHWTWL
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Known secondary structure (DSSP)

SSGGGGGGGSTTT

SS
SSTTT




 .........80.........90.........100.........110.........120.........130.........140
Sequence DVAGLHLDIPVEISILTTTALMLITALNLMAQVFAVGYMEMDWGWARFFALLALFEGGMGALVLLDSLFF
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Known secondary structure (DSSP)

SS




T
S



B

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NYVVLEILTLATYLLIGLWFNQPLVVTGARDAFLTKRVGDLVLLMGVLAIYPLAGSWNYDDLAAWAATAQ
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Known secondary structure (DSSP) TSSTTSTTTSS

SSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence VNSTLITLICLALIAGPMGKCAQFPLHLWLDEAMEGPIPASILRNAVVVATGAWVLVKLTPVLSLSPVAL
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Known secondary structure (DSSP)

TTBTTBT

SSTTTTTTTTTTTT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TALLVIGSVTALGGTLIAIAQVDIKRALSYLVSAYMGWVFIAVGLKEPGLAFVFILTYSLAMAVLMMSIG
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Known secondary structure (DSSP) T

BTTTTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SIIWNSVTQDLRLLGGLWSRRPISGISFLVGSAGLLAVPPLASFFPQAELLDTAFAQLPWVGGVLLLMNT
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Known secondary structure (DSSP) S


BGGG



TTT
STTS

TTSTTTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FAAFSLGRTFCLVWGGEVKPMTARSPEVFWPMILPMTVDLGLVLHLPILMARFDWVIWTQPSLATAAALT
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Known secondary structure (DSSP) TSS


GGGSS




S


S
SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence ITALLGWGVAAWVYLGKAIPKPVQFPLPSVQNLLAYDFYTPKLYRATVVGVVDMISRITAWFDRTFVDGT
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Known secondary structure (DSSP) SS
SS
SS


SSTTGGGT
 .........570.........580.........590.........600
Sequence GNAFGVVTLLGGDRLKYSTTGQSQAYILTILMGIAILVIA
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Known secondary structure (DSSP) TTGGGS
S
TTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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