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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v4xH_

Fold library idPDB HeaderMoleculeTitle
c6v4xH_3.20PDB header: rna binding protein/rnaChain: H: PDB Molecule: cleavage and polyadenylation specificity factor subunit 3;


Added to library: Sat Feb 22 08:40:06 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCG
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Known secondary structure (DSSP)

SSSSSSS
TT




TTS
GGGGS
SGGGS
GGG




S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAG
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Known secondary structure (DSSP) TTSS


S
TTTTTSS
S

S

TTSSS

BT

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREER
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Known secondary structure (DSSP)


SSTT
TT

S


S

SS






SS

S
SSSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence EARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNA
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Known secondary structure (DSSP) TT




SSSSS
GGGGSS

ST

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYC
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Known secondary structure (DSSP) S
TTTTT

TTS
SS
S
TTTS


S
S
TT
SSSTTTT
SS

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence VEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLK
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Known secondary structure (DSSP)
TTSGGG

S
TTS


S




S



SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADGQRVSGILVKRNFNYHILSPCDLSNY
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Known secondary structure (DSSP) TTSSS
SS





TT











SGGG





SSSS

SSTTTTT
 .........
Sequence TDLAMSTVK
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Known secondary structure (DSSP) SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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