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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tjvD_

Fold library idPDB HeaderMoleculeTitle
c6tjvD_3.20PDB header: membrane proteinChain: D: PDB Molecule: nadh dehydrogenase subunit 4;


Added to library: Sat Feb 22 08:54:20 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLTLLIVLPVIGALLMPLLPERVLRSVALVIAGLTFALSLWMLTQFDVHQSALQFTEFVPWLLPLGLNYS
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Known secondary structure (DSSP)
SSSS
T

SS

S



GGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence LGVDGLSLPLIVLGTFLTLGVVFTGEKTGQRLFYALVLLANAGITGALAAQNLLLFFLFYELELVPFYLL
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Known secondary structure (DSSP)
TTTT

SSS
STB
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILIWGGQRREQAAVKFLIYTAVSGILVLAAFLAMGWLTHAPSFDSADIQIAGLAPTTQGILLLLLILGFG
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Known secondary structure (DSSP) SS
TTTTT
SS
BTTTT





TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IKMPLVPLHSWLPDAYVEASTPTAILLGGALAKLGAYGLVRFALGYFPEAWAQFSGLLAIVAAVGIAYGA
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Known secondary structure (DSSP) TTTT
STT
TTTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LAAIAQKDIKRMVAYSSIGHMSYVLLAAAAHTHLSMVGAIAQMISHGLILALLFYLVGVIETKVGTRELN
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Known secondary structure (DSSP)

BTS

SS

BTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VLNGLLNPLRGLPTTSALLILGGMASAGIPGLVGFVAEFLIFQGSYGMFPLPTLVAVVGTGLTAVYFVIM
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Known secondary structure (DSSP) T


TTSTTTS
SS
TTSSSS
S
 .........430.........440.........450.........460.........470........
Sequence INRTCFGRLDNRTAYYPRVVWSEKMPALVLTLLIVFLGVQPTWLVRWSETTSAQIVAA
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Known secondary structure (DSSP) TSS


TTT






GGGSSTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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