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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2019 Jun 22

Fold library idPDB HeaderMoleculeTitle
c6izrK_ 4.70 protein fibril Chain: K: putative plasmid segregation protein parm;
c6h0hB_ 1.39 sugar binding protein Chain: B: probable solute binding protein of abc transporter system
c6k0aF_ 4.60 rna binding protein/rna Chain: F: ribonuclease p protein component 1;
c6owsB_ 2.98 membrane protein Chain: B: efflux pump membrane transporter;
c6a0gA_ 1.80 flavoprotein Chain: A: 4-hydroxymandelate oxidase;
c6ov4A_ 2.10 oxidoreductase Chain: A: 3-ketoacyl-acp reductase;
c6nr84_ 7.80 chaperone Chain: 4: prefoldin subunit 4;
c6rn5A_ 2.04 unknown function Chain: A: chad domain protein;
c6hrsC_ 2.95 membrane protein Chain: C: mucolipin-2;
c6a4cA_ UNK unknown function Chain: A: uncharacterized protein mxan_0049;
c6odmW_ 4.30 viral protein Chain: W: major capsid protein;
c6riqP_ 3.10 protein fibril Chain: P: minc;
c6nr92_ 8.50 chaperone Chain: 2: prefoldin subunit 2;
c6k0bB_ 4.30 rna binding protein/rna Chain: B: ribonuclease p protein component 2;
c6gf8B_ 3.10 cell adhesion Chain: B: zona pellucida sperm-binding protein 1,zona pellucida
c6nd4K_ 4.30 ribosome Chain: K: utp9;
c6odmL_ 4.30 viral protein Chain: L: small capsomere-interacting protein;
c6rteB_ 1.94 oxidoreductase Chain: B: cytochrome c;
c6odmA_ 4.30 viral protein Chain: A: triplex capsid protein 2;
c6a2uA_ 2.60 signaling protein/oxidoreductase Chain: A: twin-arginine translocation pathway signal;
c6od7D_ 5.60 viral protein Chain: D: portal protein;
c6j91A_ 3.50 peptide binding protein/hydrolase Chain: A: small vasohibin-binding protein;
c6r3uA_ 1.90 hydrolase Chain: A: glycoside hydrolase family 32;
c6nd4Z_ 4.30 ribosome Chain: Z: imp3;
c6jcnB_ 2.00 transferase Chain: B: dehydrodolichyl diphosphate synthase complex subunit nus1;
c6k0bH_ 4.30 rna binding protein/rna Chain: H: ribonuclease p protein component 4;
c6nbrC_ 2.80 transferase Chain: C: kavalactone reductase 1;
c6k0aC_ 4.60 rna binding protein/rna Chain: C: ribonuclease p protein component 3;
c6qrqB_ 2.56 signaling protein Chain: B: oxygen-binding diiron protein;
c6a41A_ 1.97 oxidoreductase Chain: A: dehalogenase;
c6q5uF_ 2.75 virus Chain: F: major capsid protein (p3);
c6nrb5_ 8.70 chaperone Chain: 5: prefoldin subunit 5;
c6nd4Q_ 4.30 ribosome Chain: Q: utp12;
c6driA_ UNK immune system Chain: A: acan1;
c6ovbA_ 2.61 toxin Chain: A: active core crystal toxin protein 1d;
c6nd4a_ 4.30 ribosome Chain: A: mpp10;
c6ohuC_ 3.53 membrane protein, isomerase/inhibitor Chain: C: 3-beta-hydroxysteroid-delta(8),delta(7)-isomerase;
c6gn5A_ 1.41 lipid transport Chain: A: gram domain-containing protein 1c;
c6nd4U_ 4.30 ribosome Chain: U: sof1;
c6nrb3_ 8.70 chaperone Chain: 3: prefoldin subunit 3;
c6nrb1_ 8.70 chaperone Chain: 1: prefoldin subunit 1;
c6a3eD_ 2.70 transport protein Chain: D: mvm nes mutant nm15;
c6odm5_ 4.30 viral protein Chain: 5: triplex capsid protein 1;
c6nd4J_ 4.30 ribosome Chain: J: utp15;
c6gq2A_ 1.54 protein fibril Chain: A: phenol-soluble modulin alpha 3 peptide;
c6qnmB_ 2.10 signaling protein Chain: B: oxygen-binding di-iron protein;
c6dtkA_ 2.00 oxidoreductase Chain: A: superoxide dismutase c111s/d83s-c111s heterodimer;
c6q5uQ_ 2.75 virus Chain: Q: spike protein;
c6iv9A_ 1.86 rna binding protein/rna Chain: A: cas13d;
c5zhbB_ 1.85 isomerase Chain: B: cellobiose 2-epimerase;
c6nrc6_ 8.30 chaperone Chain: 6: prefoldin subunit 6;
c6jo5I_ 2.90 photosynthesis Chain: I: photosystem i reaction center subunit viii;
c6nd4S_ 4.30 ribosome Chain: S: utp18;
c6i31A_ 1.79 peptide binding protein Chain: A: evasin-3;
c6jo52_ 2.90 photosynthesis Chain: 2: chlorophyll a-b binding protein, chloroplastic;
c6ec8A_ 2.15 biosynthetic protein Chain: A: lantibiotic dehydratase domain protein;
c6nd4l_ 4.30 ribosome Chain: L: utp5;
c6nd4O_ 4.30 ribosome Chain: O: utp1;
c6o5kB_ 1.60 transcription Chain: B: transcription intermediary factor 1-beta;
c6j7bB_ 1.62 hydrolase Chain: B: small vasohibin-binding protein;
c6nd4H_ 4.30 ribosome Chain: H: utp17;
c6a2uD_ 2.60 signaling protein/oxidoreductase Chain: D: glucose dehydrogenase;
c6nd4N_ 4.30 ribosome Chain: N: utp4;
c6jtdB_ 1.85 transferase Chain: B: c-glycosyltransferase;
c6q5uN_ 2.75 virus Chain: N: infectivity protein (p16);
c6a3zA_ UNK metal binding protein Chain: A: e3 ubiquitin-protein ligase synoviolin;
c6gq5A_ 1.50 protein fibril Chain: A: phenol-soluble modulin alpha 3 peptide;
c6nd4b_ 4.30 ribosome Chain: B:
c6drsA_ 2.00 antifungal protein/inhibitor Chain: A: dihydrofolate reductase, putative;
c6gq9A_ UNK allergen Chain: A: major allergen cor a 1.0401;
c6odmK_ 4.30 viral protein Chain: K: capsid vertex component 2;
c6h57A_ 2.30 hydrolase Chain: A: probable atp-dependent rna helicase dhr1;
c6gq0A_ 1.94 sugar binding protein Chain: A: putative sugar binding protein;
c6nd4I_ 4.30 ribosome Chain: I: utp8;
c6p0xA_ 2.40 unknown function Chain: A: salmonella plasmid virulence: spvb;
c6jmqA_ 3.31 membrane protein/immune system Chain: A: large neutral amino acids transporter small subunit 1;
c6j8nA_ 1.95 peptide binding protein/hydrolase Chain: A: small vasohibin-binding protein;
c6gocA_ 1.90 carbohydrate Chain: A: duf3826 domain-containing protein;
c6j8nC_ 1.95 peptide binding protein/hydrolase Chain: C: small vasohibin-binding protein;
c6odmB_ 4.30 viral protein Chain: B: large tegument protein deneddylase;
c6o5kA_ 1.60 transcription Chain: A: transcription intermediary factor 1-beta;
c6butB_ UNK membrane protein Chain: B: sodium channel protein type 2 subunit alpha;
c6orjA_ 2.37 viral protein Chain: A: phikz164;
c6j9hA_ 2.31 peptide binding protein/hydrolase Chain: A: small vasohibin-binding protein;
c6nd4L_ 4.30 ribosome Chain: L: utp5;
c6odmC_ 4.30 viral protein Chain: C: capsid vertex component 1;
c6nd4R_ 4.30 ribosome Chain: R: utp13;
c6nd4W_ 4.30 ribosome Chain: W: utp7;
c6a48A_ 2.00 signaling protein Chain: A: reelin;
c6grlA_ 1.60 oxidoreductase Chain: A: beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate
c6qbzA_ UNK ribosomal protein Chain: A: ribosome hibernation promoting factor;
c6gqcA_ 1.40 protein fibril Chain: A: phenol-soluble modulin alpha 3 peptide;
c6rrcD_ 2.37 gene regulation Chain: D: double-strand-break repair protein rad21 homolog;
c6j9hC_ 2.31 peptide binding protein/hydrolase Chain: C: small vasohibin-binding protein;
c6j8fA_ 2.28 peptide binding protein/hydrolase Chain: A: small vasohibin-binding protein;
c6owkA_ 2.70 toxin Chain: A: pesticidal crystal protein cry1be, cry1k-like protein
c6npyA_ 3.80 immune system Chain: A: nacht, lrr and pyd domains-containing protein 3;
c6nd4D_ 4.30 ribosome Chain: D: bud21;
c6nd4M_ 4.30 ribosome Chain: M: utp10;
c6nd4P_ 4.30 ribosome Chain: P: utp6;
c6nd4T_ 4.30 ribosome Chain: T: utp21;

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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Michael Sternberg 
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