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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nd4T_

Fold library idPDB HeaderMoleculeTitle
c6nd4T_4.30PDB header: ribosomeChain: T: PDB Molecule: utp21;


Added to library: Sat Jun 22 09:20:19 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KNSKIFSPFRIIGNVSNGVPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIVALSAHFH
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Known secondary structure (DSSP)


SST



SS

TTTTTTT


SS

SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASTDDNSIFIYKKSDPQDKYPSEFYTKLT
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Known secondary structure (DSSP)
SSTT
SSSS
TTTTS
S
SSSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence VTEIQGGEIVSLQHLATYLNKLTVVTKSNVLLFNVRTGKLVFTSNEFPDQITTAEPAPVLDIIALGTVTG
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Known secondary structure (DSSP)

TTT
SS

SS
TTSS
TTTT



SS

SSSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVIMFNMRKGKRIRTIKIPQSRISSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGV
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Known secondary structure (DSSP)
SSS
S
TT


SSS
SSS
TTTT

SS
TTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQATFLNGQPIIVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLS
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Known secondary structure (DSSP)
TTSSTTT


S
SS
SSSS





SS

SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ASKDRSLWSFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENIITAHKDEK
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Known secondary structure (DSSP) TTS
SS
TTS

B





SSSS


S
SS







TTBTTB

TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence FARTWDMRNKRVGRWTFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGI
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Known secondary structure (DSSP) TTTT
SSS


TTSSSSSTTTS


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SLDGMNRKMVSCGLDGIVGFYDFNKSTLLGKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVV
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Known secondary structure (DSSP)
TTSSTTSSSS


SS
B


TTTTBTTS
TTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence RQLWGHSNRITAFDFSPEGRWIVSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTG
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Known secondary structure (DSSP)



S

SSSSTTSTTTT
SS

SSTTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence NGICIWTNRAQFKTVSTRTIDESEFIDFNTYTSLEQIDKELLTLSIGPRSKMNTLLHSHFTKQLREGSQS
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Known secondary structure (DSSP) SSGGGTS






STTT

TTS




S
SSTTS



SS
ST

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence KDYSSLLATLINFSPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNKNFELYETFMSLLFKAHGDVIH
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Known secondary structure (DSSP) T

S
TTTTT



SSS
S
TT
 .........780.........790.........800.........810..
Sequence ANNKNQDIASALQNWEDVHKKEDRLDDLVKFCMGVAAFVTTA
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Known secondary structure (DSSP) TTTT
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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