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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6q5uF_

Fold library idPDB HeaderMoleculeTitle
c6q5uF_2.75PDB header: virusChain: F: PDB Molecule: major capsid protein (p3);


Added to library: Sat Jun 22 08:57:32 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQVQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVETQTFDPANRSVFDVTPANVGIVKGFLVK
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Known secondary structure (DSSP)

SSSS
TTTTTTTS
S
TTT






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTAAIKNNHATEAVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQGAPFLSSMVTDSPIKY
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Known secondary structure (DSSP)

SS


SSGGGGG
TTS
TSSTT






SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence GDVMNVIDAPATIAAGATGELTMYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAVGANPL
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Known secondary structure (DSSP) SSSS
SSB

S
TT
SSS
SS

TT


S

S



TTTS
TTS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANL
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Known secondary structure (DSSP) S
STT
SSS

B
SSSB


TS



TTS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YRYLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTWAAQTRRRIATDFPKGVYYCDNRDKPIY
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Known secondary structure (DSSP)

SS


SSTTSSS
BSS
B
TTSS

STT
SSS
B
 .........360.........370.........380.........390....
Sequence TLQYGNVGFVVNPKTVNQNARLLMGYEYFTSRTELVNAGTISTT
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Known secondary structure (DSSP)
SSGGGS


SS


TTSSTT


S
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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