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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nd4a_

Fold library idPDB HeaderMoleculeTitle
c6nd4a_4.30PDB header: ribosomeChain: A: PDB Molecule: mpp10;


Added to library: Sat Jun 22 08:38:50 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIEYLLFEEPTGYAVFKVKLQQDDIGSRLKEVQEQINDFGAFTKLIELVSFAPFKGAAEALENANDISEG
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Known secondary structure (DSSP)



SSS
S


SSSSS
TT
TTT



SSSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVSESLKAILDLNLPKASSKKKNITLAISDKNLGPSIKEEFPYVDCISNELAQDLIRGVRLHGEKLFKGL
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Known secondary structure (DSSP)


S



SSSS

S
ST
TT

TGGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSGDLERAQLGLGHAYSRAKVKFSKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNY
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Known secondary structure (DSSP) S
S






TTT
ST


 .........220.........230.........240.........250.........260.........270.........280
Sequence TFAKLVLFIKDKAXXXXXXXXXXXXXXXXXXXXXXXXXXSETDMENVCVFAQRVASLADYRRQLYDYLCE
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Known secondary structure (DSSP)

S




STTT

S

S



 .........290.........300.........310.........320.........330.........340.........350
Sequence KMHTVAPNLSELIGEVIGARLISHAGSLTNLSKQAASTVQILKNKGRISRYLANKCSMASRIDNYSEEPS
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Known secondary structure (DSSP)
T
SSSTTS
TTTS




SS

 .........360........
Sequence NVFGSVLKKQVEQRLEFY
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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