Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6a48A_

Fold library idPDB HeaderMoleculeTitle
c6a48A_2.00PDB header: signaling proteinChain: A: PDB Molecule: reelin;


Added to library: Sat Jun 22 08:31:20 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVILRDDFDSYLNPNIWVECSNCEMGEQCGTIMHGNAVTFCEPYGPRELTTTCLNTTTASVLQFSIGSGS
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

SS



TTTB


BS
STT

SSSS


SSS

B

B

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence CRFSYSDPSITVSYAKNNTADWIQLEKIRAPSNVSTVIHILYLPEEAKGESVQFQWKQDSLRVYEACWAL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S


SS


TT
S





SSS


GGG
SSS






S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DNILVINSAHREVVLEDNLDPVDTGNWLFFPGATVKHSCQSDGNSIYFHGNSEFNFATTRDVDLSTEDIQ
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP) SSS

S

STT

GGGBS

TTS
TT
SS







B

B



S


 .........220.........230.........240.........250.........260.........270.........280
Sequence EQWSEEFESQPTGWDILGAVVGADCGTVESGLSLVFLKDGERKLCTPYMDTTGYGNLRFYFVMGGICDPG
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP)
S

SS

TT
S

TT

SSSS

SSS




B

TT

STTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence VSHENDIILYAKIEGRKEHIALDTLTYSSYKVPSLVSVVINPELQTPATKFCLRQKSHQGYNRNVWAVDF
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
SGGG
TT



TTT
SS


GGG
SSSS

SSTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FHVLPVLPSTMSHMIQFSINLGCGTHQPGNSVSLEFSTNHGRSWSLLHTECLPEICAGPHLPHSTVYSSE
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)
SS
TT

SSSS

TT
SSTTSS
S


B
TTT

SS
B


STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NYSGWNRITIPLPNAALTRDTRIRWRQTGPGNMWAIDNVYIGPSCLKFCSGRGQCTRHGCKCDPGFSGPA
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) T

S

GGG
SSSB







GGGGGGSTT
TTSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence CEMASQTFPMFISESFGSARLSSYHNFYSIRGAEVSFGCGVLASGKALVFNKDGRRQLITSFLDSSQSRF
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP) S
SS


S




S
GGG
TTS
STT

SSSS

SSS



TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence LQFTLRLGSSTCRAPDQPGEGVLLHYSYDNGITWKLLEHYSYVNYHEPRIISVELPDDARQFGIQFRWWQ
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



S



STT
SSSTTS


TTS
SS


GGG

 .........640.........650.
Sequence PYHSSQGEDVWAIDEIVMTSR
Predicted secondary structure









SS confidence




















Known secondary structure (DSSP)



SSS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D