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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nd4M_

Fold library idPDB HeaderMoleculeTitle
c6nd4M_4.30PDB header: ribosomeChain: M: PDB Molecule: utp10;


Added to library: Sat Jun 22 08:33:10 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSLSDQLAQVASNNATVALDRKRRQKLHSASLIYNSKTAATQDYDFIFENASKALEELSQIEPKFAIFSR
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Known secondary structure (DSSP)

SSS


STS

SSS
TTTSTT


GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLFSESSISLDRNVQTKEEIKDLDNAINAYLLLASSKWYLAPTLHATEWLVRRFQIHVKNTEMLLLSTLN
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Known secondary structure (DSSP) TTT
SSSSS

STTS
TTGGGS
TTTTTT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence YYQTPVFKRILSIIKLPPLFNCLSNFVRSEKPPTALTMIKLFNDMDFLKLYTSYLDQCIKHNATYTNQLL
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Known secondary structure (DSSP) TTTSTTS


STTGGGGGTTT
SS


TSSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence FTTCCFINVVAFNSNNDEKLNQLVPILLEISAKLLASKSKDCQIAAHTILVVFATALPLKKTIILAAMET
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Known secondary structure (DSSP) TSS
TTTSS
S


 .........290.........300.........310.........320.........330.........340.........350
Sequence ILSNLDAKEAKHSALLTICKLFQTLKGQGNVDQLPSKIFKLFDSKFDTVSILTFLDKEDKPVCDKFITSY
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Known secondary structure (DSSP) TT

SSTTTTS

STTTT



S
TT
SS



 .........360.........370.........380.........390.........400.........410.........420
Sequence TRSIARYDRSKLNIILSLLKKIRLERYEVRLIITDLIYLSEILEDKSQLVELFEYFISINEDLVLKCLKS
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Known secondary structure (DSSP) TT
S
SS


TS


TT
 .........430.
Sequence LGLTGELFEIR
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Known secondary structure (DSSP) SS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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