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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6odm5_

Fold library idPDB HeaderMoleculeTitle
c6odm5_4.30PDB header: viral proteinChain: 5: PDB Molecule: triplex capsid protein 1;


Added to library: Sat Jun 22 08:31:05 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PNDDTEQALDKILRGTMRGGAALIGSPRHHLTRQVILTDLCQPNADRAGTLLLALRHPADLPHLAHQRAP
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GGGGSSSS



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TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PGRQTERLGEAWGQLMEATALGSGRAESGCTRAGLVSFNFLVAACAASYDARDAADAVRAHVTANYRGTR
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Known secondary structure (DSSP) TTS
STSSSTT



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TGGGSS
SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGARLDRFSECLRAMVHTHVFPHEVMRFFGGLVSWVTQDELASVTAVCAGPQEAAHTGHPGRPRSAVILP
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Known secondary structure (DSSP) TT



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 .........220.........230.........240.........250.........260.........270.........280
Sequence ACAFVDLDAELGLGGPGAAFLYLVFTYRQRRDQELCCVYVIKSQLPPRGLEPALERLFGRLRITNTIHGT
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Known secondary structure (DSSP) TTTT


S



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 .........290.........300.........310.........320.........330.........340.........350
Sequence EDMTPPAPNRNPDFPLAGLAANPQTPRCSAGQVTNPQFADRLYRWQPDLRGRPTARTCTYAAFAELGMMP
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Known secondary structure (DSSP) TT




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TT
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 .........360.........370.........380.......
Sequence EDSPRCLHRTERFGAVSVPVVILEGVVWRPGEWRACA
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Known secondary structure (DSSP)
SS


STT


S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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