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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6gocA_

Fold library idPDB HeaderMoleculeTitle
c6gocA_1.90PDB header: carbohydrateChain: A: PDB Molecule: duf3826 domain-containing protein;


Added to library: Sat Jun 22 08:34:13 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQTYETEFARPLNEVLTDIQNRFGIRLKYDIDTVGKILPYADFRIRPYSVEESLTNVLSPFDYKFVRQSG
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Known secondary structure (DSSP)


GGGTT
T
SS

TT
TTGGGG

TT
GGGT
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLYKLKAYEYPRRTDADGEKXLAYLNTLYADKQAFELRADSLRKEVRQRLGIDTLLAQCVNSTPILSKIR
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Known secondary structure (DSSP) T

TTB

TT
SSTTT








 .........150.........160.........170.........180.........190.........200.........210
Sequence KFDGYTVQNFALETLPGLYVCGSVYTPQSKGKHALIICPNGHFGGGRYREDQQQRXGTLARXGAVCVDYD
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Known secondary structure (DSSP) TT
STT
SSSS



S
TTGGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFGWGESILQVGSTAHRSSAAHTIQAXNGLLILDYXLASRKDIDTKRIGANGGSGGGTHTVLLTTLDDRF
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Known secondary structure (DSSP)
TTSGGG
SGGGSS
SST
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TASAPVVSLASHFDGGCPCESGXPIQLSAGGTCNAELAATFAPRPQLVVSDGGDWTASVPALEFPYLQRI
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Known secondary structure (DSSP)
S


SSB

SSSS
GGGGGG


TTTTS
TTSGGGGTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YGFYDAKDNVTNVHLPKEKHDFGPNKRNAVYDFFAEVFDLDKKXLDESKVTIEPESAXYSFGEKGELLPE
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Known secondary structure (DSSP) TTT
GGGTT

SS

T

GGG

GGGS



GGGG
SS
TTSTT

T
 .........430.........440....
Sequence NAIRSFDKVAAYFDKKAFAKLKSD
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Known secondary structure (DSSP) T


STTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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