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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jmqA_

Fold library idPDB HeaderMoleculeTitle
c6jmqA_3.31PDB header: membrane protein/immune systemChain: A: PDB Molecule: large neutral amino acids transporter small subunit 1;


Added to library: Sat Jun 22 09:06:01 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGALCYAELGTTISKSGGDYAY
Predicted secondary structure








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Known secondary structure (DSSP)

B
GGGGTTT
STT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVLLLTAVNCYS
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Known secondary structure (DSSP)
S

TTTTTSSSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence VKAATRVQDAFAAAKLLALALIILLGFVQIFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINP
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Known secondary structure (DSSP) TTTT


TTS




TB
SGGG
TTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLSCFGSVN
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Known secondary structure (DSSP) SSTTTTTTTS
TTTTTS
S
TTT
TTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GSLFTSSRLFFVLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAIIGMIWLRHRKPELER
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Known secondary structure (DSSP)



SGGGG
S
TTTS

TT

 .........360.........370.........380.........390.........400...
Sequence PIKVNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKN
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Known secondary structure (DSSP) S



S
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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