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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nd4J_

Fold library idPDB HeaderMoleculeTitle
c6nd4J_4.30PDB header: ribosomeChain: J: PDB Molecule: utp15;


Added to library: Sat Jun 22 09:55:47 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STARPRIITSKAPLLPQQTTPEQRYWRQYTSAQLVKEHNSVTHISFNPQHPHDFAVTSSTRVQIFSSRTR
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TT


TT
SS




SSSTTTTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVIKTFSRFKDVVYSASFRSDGKLLCAGDATGLVSVYDSYNPRTILLSINASTHPTHVTKFHTQDNKILA
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Known secondary structure (DSSP) S

SSS







SSSS

B
SSSSS
SS




SS




SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TASDDRVTRLWDISNAYEPQLELTGATDYVRTLSFIPAAPHLVATGSYDGLIRLYDTRSSGSTPIYSLNH
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Known secondary structure (DSSP)
TTS

TT
SSS
S


SS

SSSTTTTS
SSS
SSS
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DQPVENVIAVSPTQIVSCGGNNFKVWDLTSNKKLYERGNFNKAVTCLDYVENFDSPMQSALIASSLDGHV
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Known secondary structure (DSSP) SS

SSSTTTTTT


SS



S
SSS
S

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KVFDPLDNFQVKFGWKFSGPVLSCAVSPSTAQGNRHLVAGLSSGLLAIRTKKKKSNNFQRMMRGSEYQGD
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Known secondary structure (DSSP)
GGGTT

S


SS


TT
SS
TTS



S
GGG

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QEHIIHNDKVRSQRRMRAFERNINQFKWSEALDNAFVPGMAKELTLTVLQELRKRGKVRVALYGRDESTL
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Known secondary structure (DSSP) SSS













TT
TT

SSS
TS
TTGGGTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence EPLLNWCLKGIEDVRSASIVADWVAVVLELYGNTLESSPVLQELMIDLKTKVRHEIHKSKEAQRIEGMLQ
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Known secondary structure (DSSP) TT
TTTTT
 ...
Sequence LLT
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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