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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2018 Dec 22

Fold library idPDB HeaderMoleculeTitle
c6bveA_ 1.78 isomerase Chain: A: triosephosphate isomerase;
c6h7bC_ 1.89 translation Chain: C: polyadenylate-binding protein;
c6iiuA_ 2.50 signaling protein Chain: A: soluble cytochrome b562,thromboxane a2 receptor,rubredoxin,
c6iqbA_ 1.75 hydrolase Chain: A: sgnh-hydrolase family esterase;
c6iunB_ 2.38 oxidoreductase Chain: B: enoyl-coa hydratase/delta(3)-cis-delta(2)-trans-enoyl-coa
c6cb6A_ 1.80 viral protein Chain: A: protein a6;
c6nbgD_ 2.05 unknown function Chain: D: glucosamine-6-phosphate deaminase;
c6dx5B_ 2.22 hydrolase, protein binding Chain: B: rna-dependent rna polymerase;
c6ifuB_ 3.60 rna binding protein Chain: B: type iii-a crispr-associated protein csm2;
c6dmaG_ 3.36 de novo protein Chain: G: dhd15_closed_a;
c5yl1A_ 3.12 viral protein Chain: A: capsid protein;
c6iq8B_ 2.24 hydrolase Chain: B: carboxylesterase;
c6n1cB_ 2.00 hydrolase Chain: B: inorganic pyrophosphatase;
c6mwcN_ 7.50 virus/immune system Chain: N: e2;
c6f7kA_ 2.10 sugar binding protein Chain: A: tailspike;
c6ebnB_ 1.97 metal binding protein Chain: B: non canonical aromatic amino acid decarboxylase;
c6n7lB_ 2.10 oxidoreductase Chain: B: alcohol dehydrogenase;
c6aagF_ 2.45 membrane protein Chain: F: transmembrane protein 184 homolog ykr051w,autophagy-related
c6do5B_ 2.50 ligase Chain: B: kelch domain-containing protein 2;
c5zlaD_ 1.70 hydrolase Chain: D: dfa-iiiase c387a mutant;
c5od9B_ 1.13 de novo protein hydrolase Chain: B: mid1sc9;
c6musK_ 3.60 rna binding protein/rna Chain: K: uncharacterized protein csm3;
c6bwhB_ 2.18 transferase Chain: B: 2-phospho-l-lactate guanylyltransferase;
c6a34B_ 2.30 isomerase Chain: B: putative methylthioribose-1-phosphate isomerase;
c6ezrA_ 2.37 hydrolase Chain: A: beta-n-acetylglucosaminidase nag2;
c6imfB_ 2.30 toxin/antitoxin Chain: B: small serum protein 2;
c6bwiD_ 3.70 membrane protein Chain: D: transient receptor potential cation channel subfamily m
c6ifnA_ 2.90 rna binding protein Chain: A: type iii-a crispr-associated protein csm1;
c6ig0H_ 3.37 rna binding protein Chain: H: type iii-a crispr-associated ramp protein csm5;
c6ifnF_ 2.90 rna binding protein Chain: F: type iii-a crispr-associated ramp protein csm3;
c6n3qD_ 3.68 transport protein Chain: D: protein translocation protein sec63;
c6n1fD_ 2.05 oxidoreductase Chain: D: oxidoreductase, 2og-fe(ii) oxygenase family;
c6mkzB_ 2.65 signaling protein Chain: B: tumor necrosis factor receptor superfamily member 9;
c6gnyD_ 1.85 structural protein Chain: D: telomere repeats-binding bouquet formation protein 2;
c6e4pF_ 1.95 rna binding protein/rna Chain: F: rna-binding protein, putative;
c6hv92_ 4.98 dna binding protein Chain: 2: dna replication licensing factor mcm2;
c6hv8A_ 4.40 dna binding protein Chain: A: dna polymerase epsilon catalytic subunit a;
c6f9qC_ 1.40 biosynthetic protein Chain: C: 7s-cis-cis-nepetalactol cyclase;
c6mghB_ 1.95 fluorescent protein Chain: B: mirfp670nano;
c6i2tC_ 5.70 hydrolase Chain: C: cholinesterase;
c6hqwB_ 2.90 oxidoreductase Chain: B: cytochrome p450;
c6ig0B_ 3.37 rna binding protein Chain: B: type iii-a crispr-associated ramp protein csm4;
c6dx3B_ 2.05 hydrolase, protein binding Chain: B: rna-dependent rna polymerase;
c6mx4J_ 4.40 virus Chain: J: e1;
c6gnyA_ 1.85 structural protein Chain: A: membrane-anchored junction protein;
c6acsA_ 1.81 transferase Chain: A: ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-
c6bx7A_ 2.85 cell adhesion Chain: A: protocadherin-1;
c6mizC_ 6.10 membrane protein Chain: C: transient receptor potential cation channel subfamily m
c6bwiA_ 3.70 membrane protein Chain: A: transient receptor potential cation channel subfamily m
c5zvdB_ 2.59 rna binding protein Chain: B: 389aa long hypothetical nucleolar protein;
c6n1nA_ 1.60 hydrolase Chain: A: beta-lactamase;
c6gndG_ 2.89 oxidoreductase Chain: G: thioredoxin reductase;
c6i26A_ 4.30 motor protein Chain: A: midasin,midasin,midasin,midasin;
c5z1bC_ 1.45 hydrolase Chain: C: glycosyl hydrolase family 2, tim barrel domain protein;
c6musB_ 3.60 rna binding protein/rna Chain: B: uncharacterized protein csm2;
c6dkmA_ 2.38 de novo protein Chain: A: dhd131_a;
c6nbnA_ UNK transport protein Chain: A: aael005772-pa;
c6ecvB_ 1.80 transferase Chain: B: stid protein;
c6mhqE_ 3.40 membrane protein Chain: E: gap junction alpha-3 protein;
c5yzpA_ 1.58 immune system Chain: A: ifi204;
c6aemB_ 1.27 unknown function Chain: B: pkd domain;
c6hqgB_ 2.90 oxidoreductase Chain: B: cytochrome p450;
c6n3qA_ 3.68 transport protein Chain: A: protein transport protein sec61;
c5yzwA_ 2.00 immune system Chain: A: ifi204;
c5z4eA_ UNK biosynthetic protein Chain: A: txno9;
c6n91A_ 2.05 hydrolase Chain: A: adenosine deaminase;
c5ou5C_ 2.20 photosynthesis Chain: C: malic enzyme;
c6b11B_ 1.99 oxidoreductase Chain: B: 20-oxo-5-o-mycaminosyltylactone 23-monooxygenase;
c6mf8A_ UNK immune system Chain: A: t-cell receptor alpha chain c region;
c6cqdB_ 2.12 transferase Chain: B: mitogen-activated protein kinase kinase kinase kinase 1;
c6metB_ 4.50 membrane protein Chain: B: c-c chemokine receptor type 5;
c6hypA_ 4.40 motor protein Chain: A: midasin,midasin;
c6b4sB_ 2.04 allergen Chain: B: 11s globulin;
c5yysC_ 4.20 transferase Chain: C: l-fucokinase, l-fucose-1-p guanylyltransferase;
c6nbpA_ 1.70 transferase Chain: A: n-formyltransferase;
c6fwsB_ 2.50 dna binding protein Chain: B: atp-dependent dna helicase ding;
c6h70D_ 1.83 viral protein Chain: D: nanobody (vhh) nano-62;
c6gn9A_ 1.75 oxidoreductase Chain: A: thioredoxin;
c6n3qF_ 3.68 transport protein Chain: F: translocation protein sec72;
c6hqdB_ 1.80 oxidoreductase Chain: B: cytochrome p450;
c6f24A_ UNK lipid binding protein Chain: A: c-terminal ph domain from pfaph;
c6ezlB_ 2.07 transferase Chain: B: aspartate aminotransferase;
c6dx1A_ 1.65 hydrolase, protein binding Chain: A: rna-dependent rna polymerase;
c6muuE_ 3.00 rna binding protein/rna Chain: E: uncharacterized protein csm4;
c6hv97_ 4.98 dna binding protein Chain: 7: dna replication licensing factor mcm7;
c6musF_ 3.60 rna binding protein/rna Chain: F: uncharacterized protein csm5;
c6ak1B_ 2.28 oxidoreductase Chain: B: dimethyl-sulfide monooxygenase;
c6bxtB_ 2.70 membrane protein Chain: B: mitochondrial association factor 1;
c6mtzB_ 2.15 unknown function Chain: B: hepc.19480.a.b1;
c6mkbC_ 2.50 signaling protein Chain: C: tumor necrosis factor ligand superfamily member 9;
c6ecfB_ 2.50 hydrolase Chain: B: vlm2;
c6n2bA_ 2.65 cell adhesion Chain: A: tapirin;
c6dlmA_ 1.75 de novo protein Chain: A: dhd127_a;
c6n56A_ 2.35 oxidoreductase Chain: A: fumarate reductase, flavo protein subunit;
c6q4sA_ 1.83 unknown function Chain: A: pentalenene synthase;
c5y08A_ UNK biosynthetic protein Chain: A: 4-hydroxy-2,2'-bipyrrole-5-methanol synthase pigh;
c6f37B_ 2.20 sugar binding protein Chain: B: nano3,fucose-binding lectin protein;
c5z19F_ 2.50 hydrolase Chain: F: beta-glucuronidase;
c6f02C_ 3.00 hydrolase Chain: C: kallistatin;
c6ez7A_ 1.90 rna binding protein Chain: A: protein pes4;
c6iuqA_ 2.35 oxidoreductase Chain: A: prolyl 4-hydroxylase;
c6ezdD_ 2.40 ligase Chain: D: pyrrolysyl-trna synthetase;
c6ijfC_ 1.90 antitoxin Chain: C: tae4;
c6mdhA_ 1.37 signaling protein Chain: A: ubiquitin-like protein isg15;
c6e7kB_ 2.80 hydrolase Chain: B: lipoprotein lipase;
c6dcbA_ 2.00 transferase/rna Chain: A: 7sk snrna methylphosphate capping enzyme;
c6hbbA_ 1.20 protein binding Chain: A: carbon dioxide concentrating mechanism protein ccmm;
c6i52C_ 4.70 dna binding protein Chain: C: replication factor a protein 1;
c6mx4K_ 4.40 virus Chain: K: e2;
c6mkyB_ 2.90 signaling protein Chain: B: protein phosphatase 1 regulatory subunit 7;
c6f61A_ UNK antimicrobial protein Chain: A: purotoxin-6;
c6n7mC_ 1.78 unknown function Chain: C: hypothetical protein cd630_05490;
c6gnxB_ 2.90 structural protein Chain: B: telomere repeats-binding bouquet formation protein 2;
c6nb0A_ 1.90 transferase Chain: A: histidine kinase;
c6dehA_ 1.80 protein binding Chain: A: tpr repeat protein, protein-protein interaction;
c6grfA_ 1.95 signaling protein Chain: A: cysteine-rich repeat secretory protein 15;
c6f21B_ 2.10 toxin Chain: B: dendroaspis polylepis mt9;
c6dkmB_ 2.38 de novo protein Chain: B: dhd131_b;
c6bu2A_ 2.00 isomerase Chain: A: glyoxalase;
c6dx2A_ 1.61 hydrolase, protein binding Chain: A: rna-dependent rna polymerase;
c6bxwA_ 1.65 membrane protein Chain: A: mitochondrial association factor 1;
c6n3qE_ 3.68 transport protein Chain: E: translocation protein sec66;
c6ezuA_ 2.04 hydrolase Chain: A: phosphodiesterase;
c6dlmB_ 1.75 de novo protein Chain: B: dhd127_b;
c6n31B_ 2.60 protein binding Chain: B: ribosome biogenesis protein wdr12;
c6i27A_ 7.80 motor protein Chain: A: midasin,midasin,midasin,midasin,midasin,midasin,midasin;
c6ijfA_ 1.90 antitoxin Chain: A: tai4;
c6hv9B_ 4.98 dna binding protein Chain: B: dna polymerase epsilon subunit b;
c6n34B_ 2.80 splicing Chain: B: influenza virus ns1a-binding protein;
c6e59A_ 3.40 signaling protein Chain: A: substance-p receptor, glga glycogen synthase, substance-p
c6dmaD_ 3.36 de novo protein Chain: D: dhd15_closed_b;
c6n1mA_ 1.55 lyase Chain: A: fumarate hydratase class ii;
c6hqwA_ 2.90 oxidoreductase Chain: A: cytochrome p450;
c6dmpB_ UNK de novo protein Chain: B: designed orthogonal protein dhd13_xaaa_b;
c5zz9E_ 2.30 protein binding Chain: E: peptide from drebrin;
c6gjeB_ 2.30 protein transport Chain: B: cubilin;
c5w5pA_ 2.43 viral protein Chain: A: tail fiber protein;
c6n2cA_ 1.75 cell adhesion Chain: A: tapirin;
c6bwiB_ 3.70 membrane protein Chain: B: transient receptor potential cation channel subfamily m
c6bwiC_ 3.70 membrane protein Chain: C: transient receptor potential cation channel subfamily m
c6hv96_ 4.98 dna binding protein Chain: 6: dna replication licensing factor mcm6;
c6gncA_ 1.64 oxidoreductase Chain: A: thioredoxin reductase;
c6e7kC_ 2.80 hydrolase Chain: C: glycosylphosphatidylinositol-anchored high density
c6h5hA_ UNK unknown function Chain: A: polb4;
c5yz4A_ 2.14 ribosome Chain: A: rrna-processing protein fcf1;
c6f0bA_ 2.80 oxidoreductase Chain: A: cytochrome p450 monooxygenase;
c6i52A_ 4.70 dna binding protein Chain: A: replication factor a protein 3;
c5ovmA_ UNK chaperone Chain: A: lipase chaperone;
c6i52B_ 4.70 dna binding protein Chain: B: replication factor a protein 2;
c6gjeA_ 2.30 protein transport Chain: A: protein amnionless;
c6mzaA_ UNK oxidoreductase Chain: A: thioredoxin;
c6ectA_ 1.42 transferase Chain: A: stie protein;
c6fyqA_ 2.00 transferase Chain: A: amine transaminase;
c6h04D_ 5.60 immune system Chain: D: complement component c7;
c6dmpA_ UNK de novo protein Chain: A: designed orthogonal protein dhd13_xaaa_a;
c6hv93_ 4.98 dna binding protein Chain: 3: dna replication licensing factor mcm3;
c6mx7C_ 4.80 virus Chain: C: capsid;
c6mk5A_ UNK toxin Chain: A: toxin gtx1-15;
c6n3qB_ 3.68 transport protein Chain: B: protein transport protein sbh1;
c6aafB_ 2.20 membrane protein Chain: B: transmembrane protein 184 homolog c30d11.06c;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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