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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6fwsB_

Fold library idPDB HeaderMoleculeTitle
c6fwsB_2.50PDB header: dna binding proteinChain: B: PDB Molecule: atp-dependent dna helicase ding;


Added to library: Sat Dec 22 08:52:22 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAI
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Known secondary structure (DSSP)



TT



TTSS
S


TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFL
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Known secondary structure (DSSP) TT
SSTTTSTT




GGGB

S



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTCPFFVARREIQEAEVVVANHAL
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Known secondary structure (DSSP) T



SSTTS

SBGGG

S






S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIP
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Known secondary structure (DSSP) STTSS

GGGTGGG


S

SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence PLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELF
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Known secondary structure (DSSP) GGGSTTS
TTSS
GGG


 .........360.........370.........380.........390.........400.........410.........420
Sequence LNDLSEKDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRV
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Known secondary structure (DSSP)


S
BTTB
SSSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence SDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPS
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Known secondary structure (DSSP) TTTTSSS


SSSSS


GGGT




S
GGGT



SS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence IDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRV
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Known secondary structure (DSSP) STTTT

S
S
TT
GGGGGGBTTB
 .........570.........580.........590.........600.........610.........620.........630
Sequence ANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNL
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Known secondary structure (DSSP) TT

SSS



GGG
S
S







TT

TT
 .........640.........650.........660.........670.........680...
Sequence IQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVK
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Known secondary structure (DSSP) TTT

STT



TSSSS














Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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