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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6n3qA_

Fold library idPDB HeaderMoleculeTitle
c6n3qA_3.68PDB header: transport proteinChain: A: PDB Molecule: protein transport protein sec61;


Added to library: Sat Dec 22 08:43:56 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSNRGTLLELGVSPIITSSMIFQF
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Known secondary structure (DSSP)






S





SS


SS

SS





SSTTSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LQGTQLLQIRPESKQDRELFQIAQKVCAIILILGQALVVVMTGNYGAPLPICLLLIFQLMFASLIVMLLD
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Known secondary structure (DSSP) T
S


SS
STT



 .........150.........160.........170.........180.........190.........200.........210
Sequence ELLSKGYGLGSGISLFTATNIAEQIFWRAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFYR
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Known secondary structure (DSSP) TTSSSS




SS
SSSSSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TNLPNMFQVLMTVAIFLFVLYLQGFRYELPIRSTKVRGQIGIYPIKLFYTSNTPIMLQSALTSNIFLISQ
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Known secondary structure (DSSP) SSS

T




TTTTT



SSSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKIIPTAAAFGGA
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Known secondary structure (DSSP)

T

TTTS
ST
 .........360.........370.........380.........390.
Sequence TIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKEGGF
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Known secondary structure (DSSP) T
SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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