PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6acsA_

Fold library id	PDB Header	Molecule	Title
c6acsA_	1.81	PDB header: transferase	Chain: A: PDB Molecule: ditrans,polycis-undecaprenyl-diphosphate synthase ((2e,6e)-

Links to external resources
Added to library: Sat Dec 22 08:47:14 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D S E E Y H L P Q H V A I I M D G N N R F A K K N V L D P I V E H C V K T G V R A L T V F A F S S E N W N R P Q Y E V D L L M K L L E E T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
G G G
S T
T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H E Q I P R M K K F N I A L R F I G D R S R L P S H L V A L M E D A E Q Q T A H H E A M T L T I A V S Y G G M W D I A N A A K Q V A Q A V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S
S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G E I D A D Q I N V D L F A K Y V S L N D L P A V D L L I R T G G D F R I S N F L L W Q A A Y A E L Y F T D T L W P E F T V E E F D H A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
G G G
T T S T T T T S
S S
T T S S T T T T T T
G G G

. . . . . . . . . 220 . . . . .

Sequence N V F S G R E R R F G K T S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	E	E	Y	H	L	P	Q	H	V	A	I	I	M	D	G	N	N	R	F	A	K	K	N	V	L	D	P	I	V	E	H	C	V	K	T	G	V	R	A	L	T	V	F	A	F	S	S	E	N	W	N	R	P	Q	Y	E	V	D	L	L	M	K	L	L	E	E	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S					S									G	G	G						S												T									T	T	T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	E	Q	I	P	R	M	K	K	F	N	I	A	L	R	F	I	G	D	R	S	R	L	P	S	H	L	V	A	L	M	E	D	A	E	Q	Q	T	A	H	H	E	A	M	T	L	T	I	A	V	S	Y	G	G	M	W	D	I	A	N	A	A	K	Q	V	A	Q	A	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							S			T	T	S																	S	S		S							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	E	I	D	A	D	Q	I	N	V	D	L	F	A	K	Y	V	S	L	N	D	L	P	A	V	D	L	L	I	R	T	G	G	D	F	R	I	S	N	F	L	L	W	Q	A	A	Y	A	E	L	Y	F	T	D	T	L	W	P	E	F	T	V	E	E	F	D	H	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		G	G	G								T	T	S	T	T	T	T	S										S	S					T	T	S	S	T	T	T	T	T	T										G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	N	V	F	S	G	R	E	R	R	F	G	K	T	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)