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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6bx7A_

Fold library idPDB HeaderMoleculeTitle
c6bx7A_2.85PDB header: cell adhesionChain: A: PDB Molecule: protocadherin-1;


Added to library: Sat Dec 22 09:18:44 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVYKVPEEQPPNTLIGSLAADLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGDPCILEFE
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SS

TT


S



TTTTTTT
SS


TTT
GGGSS

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence VSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGVASYEL
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SSS
S








B
SSSTT

TT




B
SS
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNA
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TT
TTSS

S


TTT

SSSS







 .........220.........230.........240.........250.........260.........270.........280
Sequence PKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDR
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SSSTT

TT




S
GGGT
SS


TTT

S


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence EDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALV
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Known secondary structure (DSSP) TT
S
SSS









BTTB
TT

SS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QVSDRDEGENAAVTCVVAGDVPFQLRQASDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNS
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Known secondary structure (DSSP)
SS
GGGG


SS
S



SS


TTS
S

S
SS

 .........
Sequence LKVQVVDVN
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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